Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU92227 |
| length | 299 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G73850 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 37518108 ~ 37518406 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92225 | lncRNA | upstream | 5799 | 37511836 ~ 37512309 (+) | True | G73848 |
| TU92214 | lncRNA | upstream | 141493 | 37376275 ~ 37376615 (+) | True | G73838 |
| TU92208 | lncRNA | upstream | 192784 | 37325022 ~ 37325324 (+) | True | G73832 |
| TU92205 | lncRNA | upstream | 218510 | 37299385 ~ 37299598 (+) | True | G73829 |
| TU92204 | lncRNA | upstream | 219980 | 37297677 ~ 37298128 (+) | True | G73828 |
| TU92229 | lncRNA | downstream | 13210 | 37531616 ~ 37532213 (+) | True | G73852 |
| TU92249 | lncRNA | downstream | 80322 | 37598728 ~ 37602411 (+) | True | G73872 |
| TU92250 | lncRNA | downstream | 80351 | 37598757 ~ 37602411 (+) | False | G73872 |
| TU92270 | lncRNA | downstream | 129197 | 37647603 ~ 37647880 (+) | True | G73890 |
| TU92275 | lncRNA | downstream | 162961 | 37681367 ~ 37681639 (+) | True | G73895 |
| AMCG00014853 | mRNA | upstream | 488046 | 37000630 ~ 37030062 (+) | True | AMCG00014853 |
| AMCG00014852 | mRNA | upstream | 603605 | 36913400 ~ 36914503 (+) | True | AMCG00014852 |
| AMCG00014850 | mRNA | upstream | 784855 | 36617665 ~ 36733253 (+) | True | AMCG00014850 |
| AMCG00014848 | mRNA | upstream | 1220385 | 36295716 ~ 36297723 (+) | True | AMCG00014848 |
| AMCG00014837 | mRNA | upstream | 1966301 | 35551157 ~ 35551807 (+) | True | AMCG00014837 |
| AMCG00014862 | mRNA | downstream | 178254 | 37696660 ~ 37706352 (+) | True | AMCG00014862 |
| AMCG00014864 | mRNA | downstream | 235389 | 37753795 ~ 37754523 (+) | True | AMCG00014864 |
| AMCG00014863 | mRNA | downstream | 236453 | 37754859 ~ 37755848 (+) | True | AMCG00014863 |
| AMCG00014870 | mRNA | downstream | 383391 | 37901797 ~ 37904976 (+) | True | AMCG00014870 |
| AMCG00014867 | mRNA | downstream | 417185 | 37935591 ~ 37944752 (+) | True | AMCG00014867 |
| TU91690 | other | upstream | 2123459 | 35390634 ~ 35394649 (+) | False | AMCG00014836 |
| TU91622 | other | upstream | 2557661 | 34942011 ~ 34960447 (+) | True | G73343 |
| TU91608 | other | upstream | 2737518 | 34780122 ~ 34780590 (+) | True | G73329 |
| TU91569 | other | upstream | 3278708 | 34238934 ~ 34239400 (+) | True | G73292 |
| TU91511 | other | upstream | 4152008 | 33364755 ~ 33366100 (+) | True | G73244 |
| TU92541 | other | downstream | 913968 | 38432374 ~ 38432861 (+) | True | G74114 |
| TU92678 | other | downstream | 1292287 | 38810693 ~ 38811128 (+) | True | G74227 |
| TU92814 | other | downstream | 1817862 | 39336268 ~ 39475819 (+) | True | G74348 |
| TU92948 | other | downstream | 2088481 | 39606887 ~ 39621186 (+) | True | AMCG00014913 |
| TU93044 | other | downstream | 2346676 | 39865082 ~ 39872003 (+) | False | AMCG00014923 |
