RNA id: TU92205



Basic Information


Item Value
RNA id TU92205
length 214
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G73829
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37299385 ~ 37299598 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCCtatctctctccatttctccttctctctagccctctccctctctctatccctctctcagtttatctctttctttcttgtacACCAGGTTCACAATTCACTGCAGATAAAGCCAAGGAGGTTTATAATGTCAGCTGGGCTTTATTGAGGAGGCAGTGTAAAGTGGCTCGGGTGGCGTGTCTAATCTATAGACCTCTTATCATTGCAGGAAAT

Function


GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92204 lncRNA upstream 1257 37297677 ~ 37298128 (+) True G73828
TU92181 lncRNA upstream 55939 37243235 ~ 37243446 (+) True G73806
TU92177 lncRNA upstream 126209 37172931 ~ 37173176 (+) True G73802
TU92162 lncRNA upstream 136059 37160988 ~ 37163326 (+) True G73791
TU92111 lncRNA upstream 357564 36838829 ~ 36941821 (+) True G73748
TU92208 lncRNA downstream 25424 37325022 ~ 37325324 (+) True G73832
TU92214 lncRNA downstream 76677 37376275 ~ 37376615 (+) True G73838
TU92225 lncRNA downstream 212238 37511836 ~ 37512309 (+) True G73848
TU92229 lncRNA downstream 232018 37531616 ~ 37532213 (+) True G73852
TU92249 lncRNA downstream 299130 37598728 ~ 37602411 (+) True G73872
AMCG00014853 mRNA upstream 269323 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014852 mRNA upstream 384882 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014850 mRNA upstream 566132 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014848 mRNA upstream 1001662 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014837 mRNA upstream 1747578 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014862 mRNA downstream 397062 37696660 ~ 37706352 (+) True AMCG00014862
AMCG00014864 mRNA downstream 454197 37753795 ~ 37754523 (+) True AMCG00014864
AMCG00014863 mRNA downstream 455261 37754859 ~ 37755848 (+) True AMCG00014863
AMCG00014870 mRNA downstream 602199 37901797 ~ 37904976 (+) True AMCG00014870
AMCG00014867 mRNA downstream 635993 37935591 ~ 37944752 (+) True AMCG00014867
TU91690 other upstream 1904736 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 2338938 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 2518795 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 3059985 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 3933285 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 218510 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 1132776 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 1511095 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 2036670 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 2307289 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile