RNA id: AMCG00014864


Basic Information

Item Value
RNA id AMCG00014864
length 216
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00014864
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37753795 ~ 37754523 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aTGTTCTCCTCTCTACCTGCCCCCATTCAGATTGTGAAAGTCCTGAAGGAGCTGCTGAGAGTGGATGAAGACAGTGATGACTGCCAGGGAGGGAAAGCCTGTGCACTGAAGGTGATGCAGCTGTTGAAGACCGTGGAAATTTCCAAAATCAAGCAGCAGTCTCTGCCCTGTCAGGGTAAGCTGTGGCATGACTGGTGCCAGAAGAACATTCAGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92294 lncRNA upstream 7608 37745983 ~ 37746187 (+) True G73914
TU92269 lncRNA upstream 44994 37708286 ~ 37708801 (+) True G73889
TU92268 lncRNA upstream 45605 37706500 ~ 37708190 (+) True G73888
TU92276 lncRNA upstream 70253 37683315 ~ 37683542 (+) True G73896
TU92275 lncRNA upstream 72156 37681367 ~ 37681639 (+) True G73895
TU92298 lncRNA downstream 66563 37821086 ~ 37821362 (+) True G73917
TU92322 lncRNA downstream 121738 37876261 ~ 37884688 (+) True G73939
TU92327 lncRNA downstream 177999 37932522 ~ 37932795 (+) True G73944
TU92477 lncRNA downstream 556953 38311476 ~ 38313617 (+) True G74067
TU92590 lncRNA downstream 894399 38648922 ~ 38649249 (+) True G74157
AMCG00014862 mRNA upstream 47443 37696660 ~ 37706352 (+) True AMCG00014862
AMCG00014853 mRNA upstream 723733 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014852 mRNA upstream 839292 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014850 mRNA upstream 1020542 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014848 mRNA upstream 1456072 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014863 mRNA downstream 336 37754859 ~ 37755848 (+) True AMCG00014863
AMCG00014870 mRNA downstream 147274 37901797 ~ 37904976 (+) True AMCG00014870
AMCG00014867 mRNA downstream 181068 37935591 ~ 37944752 (+) True AMCG00014867
AMCG00014869 mRNA downstream 199847 37954370 ~ 37956516 (+) True AMCG00014869
AMCG00014868 mRNA downstream 210854 37965377 ~ 37966906 (+) True AMCG00014868
TU92227 other upstream 235389 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 2359146 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 2793348 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 2973205 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 3514395 34238934 ~ 34239400 (+) True G73292
TU92541 other downstream 677851 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 1056170 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 1581745 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 1852364 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 2110559 39865082 ~ 39872003 (+) False AMCG00014923