RNA id: TU91126



Basic Information


Item Value
RNA id TU91126
length 274
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G72911
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31702162 ~ 31702435 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGTCAATATAAACAACGCTGTGAGGGTTGCCCTTGGCAATGAAGCCATACTCCAGCAATAGACGCTGGTTGTCATGAGGCCCATAGCAGATGAAGGCCTGCTCATACTTCCTGCACCCTGGGCCTGTTCTGATCTCGTAGCATCTGGTCTTCTCGTTAAATGCAGCTTCCACCTATAAAAGCAACAGGAATGCTTACCAAACGCGTAGCCTATCTTCAGTAACCAGtcttgtattgattttaacttTCTGAATCTTAAAGATACTCTTAATTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91076 lncRNA upstream 110057 31524315 ~ 31592105 (+) True G72875
TU91067 lncRNA upstream 178975 31520346 ~ 31523187 (+) True AMCG00014793
TU91052 lncRNA upstream 238351 31462146 ~ 31463811 (+) True G72861
TU90999 lncRNA upstream 414728 31278087 ~ 31287434 (+) True G72815
TU90997 lncRNA upstream 419304 31278087 ~ 31282858 (+) False G72815
TU91127 lncRNA downstream 711 31703146 ~ 31703573 (+) True G72912
TU91145 lncRNA downstream 43088 31745523 ~ 31746900 (+) True G72926
TU91158 lncRNA downstream 88466 31790901 ~ 31792354 (+) False AMCG00014799
TU91238 lncRNA downstream 253817 31956252 ~ 31962969 (+) True AMCG00014811
TU91249 lncRNA downstream 263487 31965922 ~ 31966189 (+) True G73017
AMCG00014800 mRNA upstream 5989 31681531 ~ 31696173 (+) True AMCG00014800
AMCG00014793 mRNA upstream 181758 31512808 ~ 31520404 (+) False AMCG00014793
AMCG00014792 mRNA upstream 371487 31312973 ~ 31330675 (+) True AMCG00014792
AMCG00014788 mRNA upstream 393900 31297750 ~ 31308262 (+) True AMCG00014788
AMCG00014787 mRNA upstream 437907 31241301 ~ 31264255 (+) True AMCG00014787
AMCG00014801 mRNA downstream 4813 31707248 ~ 31709519 (+) True AMCG00014801
AMCG00014798 mRNA downstream 24851 31727286 ~ 31741350 (+) True AMCG00014798
AMCG00014804 mRNA downstream 50841 31753276 ~ 31763835 (+) True AMCG00014804
AMCG00014805 mRNA downstream 61745 31764180 ~ 31765038 (+) True AMCG00014805
AMCG00014803 mRNA downstream 63629 31766064 ~ 31769661 (+) True AMCG00014803
TU90967 other upstream 705799 30990063 ~ 30996363 (+) True G72787
TU90966 other upstream 721910 30979570 ~ 30980252 (+) True G72786
TU90965 other upstream 723337 30978216 ~ 30978825 (+) True G72785
TU90928 other upstream 896421 30764351 ~ 30805741 (+) False AMCG00014777
TU90740 other upstream 1850341 29851450 ~ 29851821 (+) True G72605
TU91144 other downstream 14683 31717118 ~ 31754930 (+) True G72925
TU91344 other downstream 840075 32542510 ~ 32561489 (+) True G73103
TU91511 other downstream 1662320 33364755 ~ 33366100 (+) True G73244
TU91569 other downstream 2536499 34238934 ~ 34239400 (+) True G73292
TU91608 other downstream 3077687 34780122 ~ 34780590 (+) True G73329

Expression Profile