RNA id: AMCG00015797



Basic Information


Item Value
RNA id AMCG00015797
length 641
RNA type mRNA
GC content 0.46
exon number 5
gene id AMCG00015797
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 22707188 ~ 22715143 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCAGTAGAGCCGGAGGAGATGAACGGGCCAGAGGTAGCGAAGACGCCGGGGGGCGGAAATGCACCGGGGAAGGAGGAGCCGGTGTCCAATGGGCATGGAGAGAGTGATGCCAATCCCTTCGCAGAGTATATGTGGATGGAGAATGAGGAGGAATACAACCGACAGGTAGAGGAGGAGCTTTTGGAGCAGGAATTCCTGGAGCGCTGCTTCCAGGAGATGCTTGATGAGGAGGATCAGGATTGGTTCATTCCAGCGAGAGATCTCCCCTCGGGACGTAAGAGCAGCTTAAATCCTGAAGCGAAGGAGTTTGTGCCCGGTGTGAAATACTAGGACCCGAAGAGGCCCCCccagaggagaaaaataaaataatgaaaataataaagactcTGGTGTCCGGTGTACCATCGGGCACACGCTGCACAAACTCGGGACTGGGAAACGAGGAAAATTTATTATAtaagctttttatttctgtttttgtgttttctttttgcggggggaggggggggacagTATTACAATACTGTAGTTATATATAAAGAATTACACAGTGTACATCAATAAGTGTTatgttctttcctttttttcttttctattttttttgtttgttgggtttttttttttttttttttttttgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU125697 lncRNA upstream 257972 22446374 ~ 22449216 (+) True G100641
TU125695 lncRNA upstream 418340 22288623 ~ 22288848 (+) True G100639
TU125610 lncRNA upstream 892473 21814371 ~ 21814715 (+) True G100568
TU125542 lncRNA upstream 1396583 21306606 ~ 21310605 (+) True G100507
TU125537 lncRNA upstream 1641803 21064050 ~ 21065385 (+) True G100502
TU125775 lncRNA downstream 105358 22820501 ~ 22820703 (+) True G100707
TU125778 lncRNA downstream 120111 22835254 ~ 22923396 (+) True G100709
TU125866 lncRNA downstream 500908 23216051 ~ 23218316 (+) True G100776
TU125896 lncRNA downstream 568548 23283691 ~ 23284077 (+) True G100801
TU125958 lncRNA downstream 1047148 23762291 ~ 23762523 (+) True G100858
AMCG00015796 mRNA upstream 23293 22678837 ~ 22683895 (+) True AMCG00015796
AMCG00015795 mRNA upstream 42220 22661061 ~ 22664968 (+) True AMCG00015795
AMCG00015788 mRNA upstream 528931 22166231 ~ 22178257 (+) True AMCG00015788
AMCG00015787 mRNA upstream 561117 22103118 ~ 22146071 (+) True AMCG00015787
AMCG00015786 mRNA upstream 641829 22045949 ~ 22065359 (+) True AMCG00015786
AMCG00015794 mRNA downstream 42992 22758135 ~ 22767486 (+) True AMCG00015794
AMCG00015801 mRNA downstream 135661 22850804 ~ 22874803 (+) True AMCG00015801
AMCG00015807 mRNA downstream 179621 22894764 ~ 22907142 (+) True AMCG00015807
AMCG00015806 mRNA downstream 204037 22919180 ~ 22920439 (+) True AMCG00015806
AMCG00015811 mRNA downstream 233519 22948662 ~ 22958584 (+) True AMCG00015811
TU125724 other upstream 26415 22680210 ~ 22680773 (+) False AMCG00015796
TU125356 other upstream 2438903 20267407 ~ 20268285 (+) True G100338
TU125009 other upstream 3935222 18744887 ~ 18771966 (+) True AMCG00015725
TU124919 other upstream 4381284 18320056 ~ 18325904 (+) True G100007
TU124723 other upstream 5575439 17098459 ~ 17131749 (+) False AMCG00015703
TU126202 other downstream 2149946 24865089 ~ 24865552 (+) True G101061
TU126442 other downstream 3548772 26263915 ~ 26264308 (+) True G101248
TU126474 other downstream 3658010 26373153 ~ 26377699 (+) True G101275
TU126639 other downstream 5175409 27890552 ~ 27992014 (+) False G101400
TU126748 other downstream 5862357 28577500 ~ 28580829 (+) True AMCG00015901

Expression Profile