Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00009346 |
| length | 511 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 4 |
| gene id | XLOC_004717 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 23812530 ~ 23935333 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042407 | cristae formation | biological_process |
| GO:0008380 | RNA splicing | biological_process |
| GO:0044422 | obsolete organelle part | cellular_component |
| GO:0044446 | obsolete intracellular organelle part | cellular_component |
| GO:0032991 | protein-containing complex | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-990706-5 | Predicted to enable actin filament binding activity and phosphatidylinositol-4,5-bisphosphate binding activity. Predicted to be involved in actin filament severing; actin polymerization or depolymerization; and barbed-end actin filament capping. Predicted to act upstream of or within cytoskeleton organization. Predicted to be active in actin cytoskeleton and cytoplasm. Is expressed in several structures, including adaxial cell; cardiovascular system; musculature system; optic vesicle; and sensory system. Human ortholog(s) of this gene implicated in myofibrillar myopathy 10. Orthologous to human SVIL (supervillin). |
| ensembl_id | ENSDART00000152852 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00010737 | lncRNA | upstream | 33540 | 23812530 ~ 23859432 (+) | False | XLOC_004717 |
| TCONS_00010736 | lncRNA | upstream | 113795 | 23778952 ~ 23779177 (+) | True | XLOC_004716 |
| TCONS_00010935 | lncRNA | upstream | 241916 | 23649892 ~ 23651056 (+) | True | XLOC_004713 |
| TCONS_00010933 | lncRNA | upstream | 287250 | 23589024 ~ 23605722 (+) | False | XLOC_004711 |
| TCONS_00010738 | lncRNA | downstream | 1040034 | 24944172 ~ 24944504 (+) | True | XLOC_004726 |
| TCONS_00009368 | lncRNA | downstream | 1169167 | 25073305 ~ 25075120 (+) | False | XLOC_004728 |
| TCONS_00010739 | lncRNA | downstream | 1169380 | 25073518 ~ 25075120 (+) | True | XLOC_004728 |
| TCONS_00009371 | lncRNA | downstream | 1297405 | 25201543 ~ 25214727 (+) | False | XLOC_004731 |
| TCONS_00010936 | lncRNA | downstream | 1301393 | 25205531 ~ 25214727 (+) | False | XLOC_004731 |
| TCONS_00009345 | mRNA | upstream | 13261 | 23875318 ~ 23879711 (+) | False | XLOC_004717 |
| TCONS_00009342 | mRNA | upstream | 22324 | 23850661 ~ 23870648 (+) | False | XLOC_004717 |
| TCONS_00009339 | mRNA | upstream | 96265 | 23762966 ~ 23796707 (+) | True | XLOC_004715 |
| TCONS_00009338 | mRNA | upstream | 96406 | 23762966 ~ 23796566 (+) | False | XLOC_004715 |
| TCONS_00009337 | mRNA | upstream | 218351 | 23664335 ~ 23674621 (+) | True | XLOC_004714 |
| TCONS_00009348 | mRNA | downstream | 7936 | 23912074 ~ 23932576 (+) | False | XLOC_004717 |
| TCONS_00009350 | mRNA | downstream | 87138 | 23991276 ~ 24053079 (+) | False | XLOC_004719 |
| TCONS_00009351 | mRNA | downstream | 87501 | 23991639 ~ 24053079 (+) | True | XLOC_004719 |
| TCONS_00009352 | mRNA | downstream | 156756 | 24060894 ~ 24077141 (+) | True | XLOC_004720 |
| TCONS_00009354 | mRNA | downstream | 438165 | 24342303 ~ 24636681 (+) | False | XLOC_004722 |
| TCONS_00009341 | other | upstream | 26619 | 23838799 ~ 23866353 (+) | False | XLOC_004717 |
| TCONS_00009336 | other | upstream | 315581 | 23577266 ~ 23577391 (+) | True | XLOC_004712 |
| TCONS_00009332 | other | upstream | 782695 | 23110163 ~ 23110277 (+) | True | XLOC_004708 |
| TCONS_00009330 | other | upstream | 960951 | 22921477 ~ 22932021 (+) | False | XLOC_004706 |
| TCONS_00009319 | other | upstream | 1147189 | 22677953 ~ 22745783 (+) | False | XLOC_004704 |
| TCONS_00009347 | other | downstream | 6694 | 23910832 ~ 23910949 (+) | True | XLOC_004718 |
| TCONS_00009349 | other | downstream | 19187 | 23923325 ~ 23932015 (+) | True | XLOC_004717 |
| TCONS_00009353 | other | downstream | 310263 | 24214401 ~ 24214517 (+) | True | XLOC_004721 |
| TCONS_00009355 | other | downstream | 438193 | 24342331 ~ 24345493 (+) | False | XLOC_004722 |
| TCONS_00009361 | other | downstream | 514086 | 24418224 ~ 24418340 (+) | True | XLOC_004723 |
