RNA id: TU144763


Basic Information

Item Value
RNA id TU144763
length 207
lncRNA type intronic
GC content 0.37
exon number 1
gene id G115580
representative True

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 7742541 ~ 7742747 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

attcatTGGAAAGGCTGCTTTAAAATTTGCCATACTTTTGATCATATTTGTAGTAGTAGATAACTACACTGTGTACTCACGCTTTTTTCCTTTGGTAAACCGTGTAGCTCATATAAGTGATAAACATTAAAGCCAGAATGCCAAGGATGGCACATAAAGAGATTGCTAGCACAGCGTTTGCAGATTGCTGGATTCCATCTTCATTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU144762 lncRNA downstream 331 7741974 ~ 7742210 (-) True G115579
TU144760 lncRNA downstream 8157 7734097 ~ 7734384 (-) True G115577
TU144711 lncRNA downstream 740536 7001802 ~ 7002005 (-) True G115534
TU144532 lncRNA downstream 1523325 6217528 ~ 6219216 (-) True G115395
TU144448 lncRNA downstream 1695923 6046030 ~ 6046618 (-) True G115332
TU144788 lncRNA upstream 99590 7842337 ~ 7842708 (-) True G115596
TU144791 lncRNA upstream 117569 7860316 ~ 7868626 (-) True G115599
TU144949 lncRNA upstream 687379 8430126 ~ 8433570 (-) True G115732
TU145037 lncRNA upstream 774587 8517334 ~ 8519203 (-) True G115807
TU145083 lncRNA upstream 899599 8642346 ~ 8648687 (-) True AMCG00018344
AMCG00018303 mRNA downstream 581907 7153091 ~ 7160634 (-) True AMCG00018303
AMCG00018302 mRNA downstream 605694 7133898 ~ 7136847 (-) True AMCG00018302
AMCG00018304 mRNA downstream 866363 6866912 ~ 6876178 (-) True AMCG00018304
AMCG00018301 mRNA downstream 891747 6827619 ~ 6850794 (-) True AMCG00018301
AMCG00018299 mRNA downstream 916318 6821595 ~ 6826223 (-) True AMCG00018299
AMCG00018306 mRNA upstream 2349 7745096 ~ 7763759 (-) True AMCG00018306
AMCG00018310 mRNA upstream 140460 7883207 ~ 7894569 (-) True AMCG00018310
AMCG00018311 mRNA upstream 201370 7944117 ~ 7972869 (-) True AMCG00018311
AMCG00018314 mRNA upstream 297763 8040510 ~ 8045893 (-) True AMCG00018314
AMCG00018315 mRNA upstream 325454 8068201 ~ 8073947 (-) True AMCG00018315
TU144582 other downstream 1099269 6638342 ~ 6643272 (-) False AMCG00018291
TU144568 other downstream 1118928 6618475 ~ 6623613 (-) False AMCG00018291
TU144435 other downstream 1791486 5950421 ~ 5951055 (-) True G115320
TU144300 other downstream 2375787 5356846 ~ 5366754 (-) True AMCG00018251
TU144253 other downstream 2438153 5300107 ~ 5304388 (-) False G115183
TU144767 other upstream 471 7743218 ~ 7773892 (-) True G115581
TU145207 other upstream 1497065 9239812 ~ 9258202 (-) True AMCG00018364
TU145480 other upstream 2176299 9919046 ~ 9924582 (-) True G116165
TU145571 other upstream 2386813 10129560 ~ 10136769 (-) False AMCG00018416
TU145658 other upstream 2564843 10307590 ~ 10309195 (-) False AMCG00018424

Expression Profile