RNA id: TU47373



Basic Information


Item Value
RNA id TU47373
length 250
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G37972
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 49584123 ~ 49584372 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCGGGCGCTGGCAGCCATGGATGCGGGAGAGTCTCTTAGACGTGGCAAGACATCAACCAGAGCTCCACACCGCTAGCGCGCTACCACTGCAGACCAGCCGCCAgtctttgtgtatgtttttctcCAGCGGTTCCCGAAGATCACCTCAACATGGCCGACAGGCAGCAGACGATGCCGCGGTGCAGCCTGGGACAGGGGCCGGGAGGGGGGTTGTACGGAGTTTGCGCAATAGCGAGGGGCAGCAGTTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU47372 lncRNA upstream 6650 49577122 ~ 49577473 (+) True G37971
TU47370 lncRNA upstream 11358 49572532 ~ 49572765 (+) True G37969
TU47367 lncRNA upstream 15266 49568592 ~ 49568857 (+) True G37966
TU47364 lncRNA upstream 22334 49561503 ~ 49561789 (+) True G37963
TU47271 lncRNA upstream 669614 48914246 ~ 48914509 (+) True G37876
TU47395 lncRNA downstream 114648 49699020 ~ 49767628 (+) True G37990
TU47414 lncRNA downstream 254042 49838414 ~ 49838646 (+) True G38009
TU47416 lncRNA downstream 261353 49845725 ~ 49845950 (+) True G38011
TU47434 lncRNA downstream 380168 49964540 ~ 49964828 (+) True G38029
TU47458 lncRNA downstream 902033 50486405 ~ 50489323 (+) True G38046
AMCG00019852 mRNA upstream 50979 49523139 ~ 49533144 (+) True AMCG00019852
AMCG00019848 mRNA upstream 221738 49341714 ~ 49362385 (+) True AMCG00019848
AMCG00019849 mRNA upstream 255675 49324219 ~ 49328448 (+) True AMCG00019849
AMCG00019845 mRNA upstream 295496 49285039 ~ 49288627 (+) True AMCG00019845
AMCG00019843 mRNA upstream 465497 49111751 ~ 49118626 (+) True AMCG00019843
AMCG00019855 mRNA downstream 44005 49628377 ~ 49637820 (+) True AMCG00019855
AMCG00019858 mRNA downstream 351547 49935919 ~ 49956715 (+) True AMCG00019858
AMCG00019861 mRNA downstream 939319 50523691 ~ 50528261 (+) True AMCG00019861
AMCG00019864 mRNA downstream 1033625 50617997 ~ 50680975 (+) True AMCG00019864
AMCG00019867 mRNA downstream 1220019 50804391 ~ 50843575 (+) True AMCG00019867
TU47369 other upstream 12637 49571187 ~ 49571486 (+) True G37968
TU47365 other upstream 20909 49562894 ~ 49563214 (+) True G37964
TU47362 other upstream 22740 49558482 ~ 49561383 (+) True G37962
TU47161 other upstream 1132956 48450628 ~ 48451167 (+) True G37779
TU46904 other upstream 2792638 46791027 ~ 46791485 (+) True G37561
TU47520 other downstream 1259383 50843755 ~ 50845879 (+) True G38084

Expression Profile