RNA id: TU47364


Basic Information

Item Value
RNA id TU47364
length 287
lncRNA type inter_gene
GC content 0.67
exon number 1
gene id G37963
representative True

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 49561503 ~ 49561789 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCGTGGCTTGATCGGCGCAGTGCGAAGcgggtgctgctgctgctgctgctgctgcattcTGGGATTGATCTGGGGCGGCAGGTTGTGCATCTGCGCTCTGAAGGGCGGCGGCGTGTTGTGCAGCAGGGGCCGCTGAGCCGGGGGGTGGTGTTGGTGCTGGGGCGGGTGGTGCTGGTGCTGCGGGGGGTGGTGCTGGTGCTGCAGGTTCTGGTGCAGATGGTGCTGAGGAGGCGGCTGATCATGGTGGGGGGGTTCGGAGTGCATGGGGGGTTGCATCAGCCCCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47271 lncRNA upstream 646994 48914246 ~ 48914509 (+) True G37876
TU47266 lncRNA upstream 697743 48863531 ~ 48863760 (+) True G37871
TU47212 lncRNA upstream 923339 48637343 ~ 48638164 (+) True G37820
TU47171 lncRNA upstream 985852 48522875 ~ 48575651 (+) False G37784
TU47168 lncRNA upstream 1012322 48543625 ~ 48549181 (+) True G37783
TU47367 lncRNA downstream 6803 49568592 ~ 49568857 (+) True G37966
TU47370 lncRNA downstream 10743 49572532 ~ 49572765 (+) True G37969
TU47372 lncRNA downstream 15333 49577122 ~ 49577473 (+) True G37971
TU47373 lncRNA downstream 22334 49584123 ~ 49584372 (+) True G37972
TU47395 lncRNA downstream 137231 49699020 ~ 49767628 (+) True G37990
AMCG00019852 mRNA upstream 28359 49523139 ~ 49533144 (+) True AMCG00019852
AMCG00019848 mRNA upstream 199118 49341714 ~ 49362385 (+) True AMCG00019848
AMCG00019849 mRNA upstream 233055 49324219 ~ 49328448 (+) True AMCG00019849
AMCG00019845 mRNA upstream 272876 49285039 ~ 49288627 (+) True AMCG00019845
AMCG00019843 mRNA upstream 442877 49111751 ~ 49118626 (+) True AMCG00019843
AMCG00019855 mRNA downstream 66588 49628377 ~ 49637820 (+) True AMCG00019855
AMCG00019858 mRNA downstream 374130 49935919 ~ 49956715 (+) True AMCG00019858
AMCG00019861 mRNA downstream 961902 50523691 ~ 50528261 (+) True AMCG00019861
AMCG00019864 mRNA downstream 1056208 50617997 ~ 50680975 (+) True AMCG00019864
AMCG00019867 mRNA downstream 1242602 50804391 ~ 50843575 (+) True AMCG00019867
TU47362 other upstream 120 49558482 ~ 49561383 (+) True G37962
TU47161 other upstream 1110336 48450628 ~ 48451167 (+) True G37779
TU46904 other upstream 2770018 46791027 ~ 46791485 (+) True G37561
TU46693 other upstream 4221884 45279455 ~ 45339619 (+) False G37372
TU46357 other upstream 5504900 44053074 ~ 44056603 (+) True G37105
TU47365 other downstream 1105 49562894 ~ 49563214 (+) True G37964
TU47369 other downstream 9398 49571187 ~ 49571486 (+) True G37968
TU47520 other downstream 1281966 50843755 ~ 50845879 (+) True G38084