RNA id: TU74866



Basic Information


Item Value
RNA id TU74866
length 303
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G59853
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3780898 ~ 3796706 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCTGTGACTAGTGCttggttttttatttattttaaatgcatgtgtattCATAGGtagatttatttctttaaatcctTCTCTTCGTCCCTACCTCCATACAGGGGTTTTTAAGCAGAAGGCTAAAGGGATCCATCAAAAGGACAAAGAGCCAGCCCAAACTCGACAGAAACAGCAGCTTCCGGCACATTCTCCCTGGCTTCAGGAGCGTGGACAATGAGAGGGGAGCTGTGGtctcacacacagcagagacaATTCGCTGATCTGAATATCCAACTGCAGCCTTAATCATTTACACGACGACTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74865 lncRNA downstream 105884 3671023 ~ 3675014 (-) True G59852
TU74836 lncRNA downstream 133564 3646039 ~ 3647334 (-) True G59826
TU74837 lncRNA downstream 138784 3640038 ~ 3642114 (-) True G59827
TU74835 lncRNA downstream 183138 3597205 ~ 3597760 (-) True G59825
TU74817 lncRNA downstream 289849 3490718 ~ 3491049 (-) True G59810
TU74878 lncRNA upstream 242809 4039515 ~ 4039918 (-) True G59862
TU74898 lncRNA upstream 298644 4095350 ~ 4095984 (-) True G59880
TU74938 lncRNA upstream 511970 4308676 ~ 4308945 (-) True G59907
TU74954 lncRNA upstream 825271 4621977 ~ 4622357 (-) True G59922
TU74974 lncRNA upstream 851316 4648022 ~ 4651002 (-) True G59932
AMCG00019949 mRNA downstream 52372 3722895 ~ 3728526 (-) True AMCG00019949
AMCG00019950 mRNA downstream 74801 3675107 ~ 3706097 (-) True AMCG00019950
AMCG00019946 mRNA downstream 251262 3523288 ~ 3529636 (-) True AMCG00019946
AMCG00019947 mRNA downstream 283152 3496276 ~ 3497746 (-) True AMCG00019947
AMCG00019944 mRNA downstream 401301 3340802 ~ 3379597 (-) True AMCG00019944
AMCG00019952 mRNA upstream 310291 4106997 ~ 4133823 (-) True AMCG00019952
AMCG00019953 mRNA upstream 346284 4142990 ~ 4164282 (-) True AMCG00019953
AMCG00019954 mRNA upstream 368093 4164799 ~ 4172609 (-) True AMCG00019954
AMCG00019955 mRNA upstream 388599 4185305 ~ 4195180 (-) True AMCG00019955
AMCG00019956 mRNA upstream 458566 4255272 ~ 4263577 (-) True AMCG00019956
TU74813 other downstream 300789 3479782 ~ 3480109 (-) True G59806
TU74745 other downstream 597832 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other downstream 597832 3178041 ~ 3183066 (-) True AMCG00019942
TU74676 other downstream 669551 3107801 ~ 3111347 (-) True G59720
TU74667 other downstream 746563 3031856 ~ 3034335 (-) True G59712
TU75113 other upstream 1215738 5012444 ~ 5061277 (-) True AMCG00019976
TU75216 other upstream 1467208 5263914 ~ 5265925 (-) True G60118
TU75221 other upstream 1479956 5276662 ~ 5278291 (-) True AMCG00019993
TU75228 other upstream 1494884 5291590 ~ 5292673 (-) False AMCG00019992
TU75483 other upstream 2653916 6450622 ~ 6453598 (-) False AMCG00020017

Expression Profile