RNA id: TU74984



Basic Information


Item Value
RNA id TU74984
length 326
lncRNA type inter_gene
GC content 0.61
exon number 1
gene id G59941
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 4673284 ~ 4673609 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATCTTCCTGTTCCCGGAGTCTGCACAAAAGTACCTGAACACTCAAGTCAAAGGGGAACCGAATGTCCTCTCACCTGGGCTGATGACCGAGCTCAGGCCGGCGTGGATCTTGCTGAAGGGGGTCGACTGCGGACTGTAGCCCGGCTGGATGGAGGGAGTGCGGACCACGGTGGGGTGACGTGGCACCGGAATGGGGGCTTCCTCCAACTCCCCGGCCTGGGGGTCCTCGAGGTCCAGGGCCTGGGATACAGACGAGGTGGAGCTCACGTCATCCAGGTCCTCGTAGAACTTTGGGGAGAGGAACGCCGATCTGGACAGATTGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74983 lncRNA downstream 1116 4671780 ~ 4672168 (-) True G59940
TU74982 lncRNA downstream 4126 4668958 ~ 4669158 (-) True G59939
TU74981 lncRNA downstream 4415 4668350 ~ 4668869 (-) True G59938
TU74974 lncRNA downstream 22282 4648022 ~ 4651002 (-) True G59932
TU74954 lncRNA downstream 50927 4621977 ~ 4622357 (-) True G59922
TU75003 lncRNA upstream 76878 4750487 ~ 4755192 (-) True G59958
TU75008 lncRNA upstream 123117 4796726 ~ 4800269 (-) True G59963
TU75029 lncRNA upstream 171188 4844797 ~ 4848796 (-) True G59979
TU75100 lncRNA upstream 312072 4985681 ~ 4989055 (-) True G60034
TU75172 lncRNA upstream 444742 5118351 ~ 5160697 (-) True G60089
AMCG00019960 mRNA downstream 45415 4622417 ~ 4627869 (-) True AMCG00019960
AMCG00019956 mRNA downstream 409707 4255272 ~ 4263577 (-) True AMCG00019956
AMCG00019955 mRNA downstream 478104 4185305 ~ 4195180 (-) True AMCG00019955
AMCG00019954 mRNA downstream 500675 4164799 ~ 4172609 (-) True AMCG00019954
AMCG00019953 mRNA downstream 509002 4142990 ~ 4164282 (-) True AMCG00019953
AMCG00019964 mRNA upstream 81915 4755524 ~ 4766859 (-) True AMCG00019964
AMCG00019968 mRNA upstream 201977 4875586 ~ 4886898 (-) True AMCG00019968
AMCG00019970 mRNA upstream 225331 4898940 ~ 4908555 (-) True AMCG00019970
AMCG00019972 mRNA upstream 256894 4930503 ~ 4940565 (-) True AMCG00019972
AMCG00019971 mRNA upstream 295581 4969190 ~ 4983211 (-) True AMCG00019971
TU74813 other downstream 1193175 3479782 ~ 3480109 (-) True G59806
TU74745 other downstream 1490218 3166237 ~ 3183066 (-) False AMCG00019942
TU74744 other downstream 1490218 3178041 ~ 3183066 (-) True AMCG00019942
TU74676 other downstream 1561937 3107801 ~ 3111347 (-) True G59720
TU74667 other downstream 1638949 3031856 ~ 3034335 (-) True G59712
TU75113 other upstream 338835 5012444 ~ 5061277 (-) True AMCG00019976
TU75216 other upstream 590305 5263914 ~ 5265925 (-) True G60118
TU75221 other upstream 603053 5276662 ~ 5278291 (-) True AMCG00019993
TU75228 other upstream 617981 5291590 ~ 5292673 (-) False AMCG00019992
TU75483 other upstream 1777013 6450622 ~ 6453598 (-) False AMCG00020017

Expression Profile