RNA id: XM_043257818.1


Basic Information

Item Value
RNA id XM_043257818.1
length 4453
RNA type mRNA
GC content 0.50
exon number 5
gene id zbtb7b
representative False

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 26349459 ~ 26373578 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGTTAGTGACTAATCTGCTCCGTCTCAATTGTGTAACATTACCAGAAGCCTTAAGACGCCACACCTGTTCCAGGGAAATCTtgttccgtgtgtgtgtgtgtgtgtgtgtgtgtgttttggatcagGTTAATCAGGTGTTGGAGTGCATTGTTGTTAAGCAGCACTCAAGGGTTTGGGAGGCCAGTATTATGGGCTGTACGGAGCCGCTGGTCGTTAGGGGAAGCCGAGAGGTCGCCGGGCTGCTGGTGGAAAGTTCCaggctcagGTGTCTGATTCAGGTGTTCGGTGTAGCAACGTCTCTTCAGCACTTCTACTggaataataaacacattaatGTGGCGATGTCTCCAGGAGAGGACGGTCTGATCGGGATCCCCTTCCCGGAGCACAGTAACGAGCTGCTGTCCCGACTCAATGCCCAGCGGCGGACCGGGCTGCTCTGTGACCTCACGCTGACCTCCCGCGGCGCTCGATACCCCACGCATCGCTCCGTGATGGCCGCGGTCAGCCTGTACTTCCGCCGTCTGTTCGGGGCGGAGGAGGGCGAGGAGGACGGAGAGGGCGTGGGCGACAGCTGCAGCGTCTGTCAGCTGGACTGCGTGTCGCCGGACGCTCTGGCCGCGCTGCTGGAGTTCGCCTACACCGCCACGCTGACCATCCGCAGCTCGGGCATGCGCGAGGTCCTGAAGGGCGCGCAGCTGCTGGGCATCCAGTGCGTGGCCGACGCCTGCCGGGACATCCTGGGCGAGACGGAGACGGGTGACGACCCCACGGAGGATGCTGAGCGACCGCCGTCCCGACGCAAGCCGGACCGCTGCTCGGTGGCCCGGGCCGCGTCTCCCGTGAGGCCGGTGTGGAGGAGCCCCTCGGCCCCGGATACGCCCCTAAGTGGGCTGCTTCCCGCGCAGGGACACCCGGGGCTAGTGGTGAACGGAGACTCGCACTGGCAGGAGTTCTCACACAGACCCGAAGACACGCCctcggaggaggaggagccaaTCGCCCAGGGGCAGGCCACGCCCCagctcagccaatcacaggGCGACGGAGCAGGGGGCGGAGCAGCGGCAGGAAACGGCAGGAAGAGGAAGTCTCAGATGCCCCAGCAGTGTCCCGTCTGTCAGAAGATCATCCACGGAGCGGGAAAGCTGCCGAGGCACATGAGAAcacacaccggagagaaaccgttccAGTGCTCGGCCTGCGGGGTCCGCTTCACACGGAACGACAAGCTGAAGATCCACATGCGGAAGCACACGGGCGAGCGGCCGTATCTGTGCTCCAGCTGCCCCGCGAGGTTCCTGCACTCCTACGACCTGAAGAACCACCTGTCTCTGCACAGCGGGGACCGGCCCTTCGAGTGTCCGCTGTGCCACAAGGCCTTCGCCCGCGAGGACCATCTGCAGCGCCACAGAAAGGGCCACAGCTGCCTGGAGCTCCGAACCCGCCGCCCGCGCTGCCCCGAGGCCCAGTCCTTCGCCCAGATCCTGGAGGGCCACGGCGGCCCCCTGGCCATCATGCCAGGGGCCCACATGCCGTATCCGGAGCTGCTGTGGCGGGCGGTCGTGGCCCCGGCCGGAGAAGTCCTGGATAAAACCGAAGGAGGCTCGTCTCCTCGTGGAAGCTCTTCGGTCGTGCAACAGTCctgggaagaggaagaggaggagcaggaAGCTgctggagaggaggaagagtgACCacgttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccaggtgAAAGAAGTGCACTTCAGTAAGTGCTCTATTTCCGTGCACTAACGATGTGCTTAAGTTATTCTTTAGTAATTCTCAAAAAACGAAAATTCTGTCGTTAattattcaccttcatgtcgttACGAGACCTTCGTTCGTCTTTGGTAcgcaaataaagatatttttgatgaaatctgaccCTTCCTAGAAAGCAAGGGTACTAACGCAATCCTTGCTCAAAAACGTAGCAAGGAAATCGtcaaagaaatctttttttatcattttacgAAACTAAGAGAAGACTTTTTGTGTGcagagaaagcaaaaaaagactttattgaACAATTTGACCTCTGCTTGACCCTGTAGTGCCATTTCCTCGAGTATGACGCACGTAAACCACGTATGTACGATGTTTATAGTTCGATCTGAACGCATACGATGTTCACACGCGTGATGCagaggagacaaattgttgaataaatgctttgctcacaaaaagtgtttttgtgcgtGAATTAGCGGTCGAAGCGCTGGTGTCACGTgggttattttaatgatgtttttgctTCGTTTCTAAGCTTCGGTGGCGTTGGGGTCCTTGAGGGCCGTCGAGGGCCGGAGAGCTCTCAGAGTTCAGcagaaatatcttcatttgttcTTACAGGTTGGCGACGGCGTCAGGGTCAGCAATTTATGACAGGATTTTTCATTTTCGGGCGAACTCTTGCTTTAAGATCGTCTAAAGACTGGGCTGTTTTGTGACGCCATAATTATGAACTAAAATGCGCTTTAAATCTCTTGAATTAAAAGAAGTAGCACTTGTAGTACACTTAACCCATCTACTTTCATACACTAGTACACTCGTACTACAAGTCCTGACTAAATTAAAACACagagatattaaaatgttaaaagcacACTTTAGTTTATATTCCTGGCGTCCCTAGACAGCCCTAAAGGATCACTTTTTGCAAAATCAGTGCGTGGAAATAGAGGTTTTAGAAGTGCACTCTTTAGTAAGCTGGTCTTCTGTTTCCGGTGCTGGAGGAGCTCCTCACGCAGGCCTCCGTTTGCGCCGTCTCTTTTGTTTCTGAGGTTTTCGACTGCTTTTGGAGCTCCGCCTCGTCTTTGTTAGTTGTCTGCGAGGCCGTGATGTTCACTTCATGCAAAATGTGAACGCGAACGAGTGCTCGAACAAACCtggtgtaaaaacaaacaaaccacgCCACCGAATGGAGGACGCATGTCGCCACCTACAGGCGAGGATCATGAAGAATTTACTGTAGCTGCTCTGAAATTTAGCCTTTTTTCCGAATAAAATGAGTTTGgaattattttcaaatgataGAATTTACTTTCATACCAAAGATTATCGGTTAGTTTGGACCCGAGATGtattttttcagatatttgtagcctttaaatgtttttttttctctgtcgtCTGAGAGAAAGACTTAAAATGGACTTCAGATCTCAGATCTCACGAAAGGGCTTTCTGCGTTTATACGCTCGGATGAGGAAACACAAGCTcatgtttggtttggtttacTTTGCTCTGTTTTTTAGGAGGATGCGCTCGGGGGGGGATTTTTGAGAAGGGATCtcgttttctttaaaaacaaaaaaacaaaaccaatggCAGGACGGAGAGTTCTTTTGTAAactattctatttatttattcgtcgGTTGGATATTTATTGTGACTTTCCTGGTTTGGGGCGCTTGGGTTGCTCTGCATCTTCTCTTTCTTACGAAGCTCGGTTCTCGGATcggttttgcctttttttaatcgTAATGGCCTCAGGTAGATGCGCGGCGAGGTCTGATCTCCGGTCAGATCCCGTCCCTCGCTCAGGTGCTGTAGAGAACTGAGATTCAGACGTCCTCTGTTTGCAGGTTTTGCACATGAATTTCTGAATAGAAGTACAATCCCTCCGATGACCAGCACAGGACAGACCGAATCAAACGAGGAGGAGTCTTGCCTTTCTTGACGCAAATGCATATCtgagatatttttgaaaagagaaaaatacctgcattatatgaaaaaaaggaaaaaaaagagagtctTTAGTGACGTTTGTAACTATAGCTTTAGCCGCTTCGTCTCGCTGCAGGAGCTTCGGCCGATCTGTAGAAGGGATGCATTCTGGGTACTGTTCTGCTGACAGTAGGGAAACTACCCGAAGAGGTTTATTTGCACTAAAACAGGATCTTTGTGTCGTGAAAATGTTGATTAGTCGCCTCTTATGATTGTAAATCCTCAAGTTCTTCAAAAACTCTTGCATCTTGAATATTAAGtactttctgttttgttttgttttgtttttttttgatgtaaagGTCAAGCTGccttagtttgttttatttgttttgcaactATTCTCAGGAAATCTTGAGCCATGCACTAAGTGGATATGCAAATGTTCGgtgaatattaatttattgtatatatcTGTGCTTGGAAATATGAACGCCCTGTTGTTGAGTAAAGTTTCTTTACATCTGTCGTTTATTCATTGTCGTGATTGAATCTGAGTTGTTTTATATCGAAAGCGGAGTTGTGATTGTGTTTGGGGTGAAGGGACGAGGCTCCTGGTCAAAGCCTTTAATCAGGgatttgttttctgttcatAGAGTGGAATCTTTCTCAGCGATGGCAAATCATTTCGCATATTGTACAAATaaagagcaaataaacaaagatttATGTATGAATAGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151335 lncRNA upstream 86658 26220234 ~ 26277550 (+) True G102385
TU151384 lncRNA upstream 94548 26266474 ~ 26269660 (+) True G102403
TU151381 lncRNA upstream 94630 26266474 ~ 26269578 (+) False G102403
TU151351 lncRNA upstream 127489 26234882 ~ 26236719 (+) True G102393
TU151282 lncRNA upstream 238148 26093845 ~ 26126060 (+) True G102348
TU151415 lncRNA downstream 14368 26387946 ~ 26388699 (+) True G102423
TU151423 lncRNA downstream 32366 26405944 ~ 26407182 (+) False LOC122357543
TU151421 lncRNA downstream 50393 26423971 ~ 26429629 (+) False LOC122357543
TU151388 lncRNA downstream 63831 26437409 ~ 26441594 (+) True G102405
TU151434 lncRNA downstream 71739 26445317 ~ 26446288 (+) True G102439
XM_043257946.1 mRNA upstream 17260 26328014 ~ 26346948 (+) True LOC122358162
XM_043258046.1 mRNA upstream 38445 26311827 ~ 26325763 (+) False pklr
XM_043258045.1 mRNA upstream 38445 26312881 ~ 26325763 (+) True pklr
XM_043258044.1 mRNA upstream 38445 26314119 ~ 26325763 (+) False pklr
XM_043257589.1 mRNA upstream 53134 26301322 ~ 26311074 (+) True LOC122357920
XM_043257806.1 mRNA downstream 755 26374333 ~ 26383784 (+) False khdc4
XM_043257808.1 mRNA downstream 755 26374333 ~ 26383784 (+) False khdc4
XM_043257810.1 mRNA downstream 755 26374333 ~ 26383784 (+) False khdc4
XM_043257807.1 mRNA downstream 755 26374333 ~ 26383784 (+) False khdc4
XM_043257809.1 mRNA downstream 755 26374333 ~ 26383784 (+) False khdc4
TU151318 other upstream 192806 26168558 ~ 26171402 (+) False gnrhr3
TU151254 other upstream 328570 26032979 ~ 26035638 (+) True G102332
unassigned_transcript_1961 other upstream 2135960 24228177 ~ 24228248 (+) True trnae-uuc_32
TU150835 other upstream 2147445 24216243 ~ 24216763 (+) True G102017
TU150815 other upstream 2274686 24086724 ~ 24089522 (+) True tmem35
XR_006252567.1 other downstream 755 26374333 ~ 26383634 (+) False khdc4

Expression Profile