RNA id: TU151254


Basic Information

Item Value
RNA id TU151254
length 1577
RNA type TUCP
GC content 0.53
exon number 3
gene id G102332
representative True

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 26032979 ~ 26035638 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attggaGACAGATGGGGAAAATAGAGTGTGTTGAGTCTGAGATCGATCTATTTATCTCCTTTATTACTGCGTTTATAAAGCCATGCTGTTGATgagaaaacatacattttattcatataatataacGCTTTCCTCTGAAAAACCCATCCAAGATCATGACAGCAACaaactttaaatgtcatttattatttattcatttttgaaacGTTGCACTAAACTGTACTGAAATCCCAAAAGGAAATGAACACAATGGAACATAAACAGACACGTATCCCAAAAATAGACCGGATTCTGGTTTCTCTTCATCTTCTCACAGCCTCTCTCTTTATCCTCCTCAGGTTCGTCGATGAAGATGACAGGGGAGCAGTGAGGCGCTGaagaaaaaggtacaaaaataataagaaatccCCTTCGAACCTTTTCAGTCCCAGCAAACCCGACCCGAGGAACGTTCGGCGGGTCGAACAGAAACACGGTTTATTTCCAAACGAAAGCGCTGCGAGCGTGTTTCTATGAAACGGTGACACTCGTTCCCAGTCCTTGGAGATCGCCAAGTTCGTTCGGGAAAGGAAAGAAGAAAACGAAAGACCCGAGCGCCGTGCGAGCGTTGAAGTGTCCGGACGTGGACTGTGCGAGGGAGACTCACGGAGCGGAGCGTTCATTCACTCAAGAACTGAAACAGCAAAGGAAACATCTAAGGTGCTCCGCCGTCTTCTAGCTGGAGCGGCACTGGACCTGGCCGTCGGAGCTCTCGTCGTCGTCGGAGCCCTCGGGGCCCCGGCTGCTCAGGCCCGTGATGCGGTAGCCCATGTTCAGCAGCATCACCTCCAGAGGATCCGCGTTCATCCGCCTCTGGTTGGCCTGAGCCGCGCTCTCCATGTCCTCCACCACCCGGCAGTTCTCGTTCTCCGCCTGGGGTCTGGGGTTCCAGATCCGCACCACGGGGTCGATGCCGCTGGTGGCCAGGAAGCAGTAGCTGGGATGCGGCTGCAGACAGTTTACTATAGACTCGTCCCCCTGTAAGATCCGAACCAGGTTCGTCGTCTCTTTCTCCCAGATGAAGAACGAGCCGTCGTCTGAACCGCTTACGATGTACTGGCCTTTACTCCGAAGAAGTTGGCTTCTTTGATATCCGTGGTGGTGTTGCAGTGACCACAGTAGCGGTGTTTGTAGTCGAAGCTTCGCTCTCTCAGCACGATCTCGTCCTCCGGGATCGACTCCTTCCGGCTGAAGTTGTGGAATCGGATGGAGCTGCTCCCCTTCTTGTCGTCAGCTGGACGCATGAAAAACACCATTACTCACACGCACGCGCCAAACAAGCCGAGATCCGGGACCGAACCTACAGGAGTCTGCTTTGGAGAAGAGCGCCGCCTTGATGTCTTTGTCGAGCGCGTCGCACGCGCTGCTGTGAGCCTGCTCGGGGAACTTGCCCTTGAAGTCGTCCAGACACTCCAGAGCCTCGGCCACGTACTTGAGCTCGAACAGGCAGCGGGCCAAGCGGAAGTGCGCCTTCAGATGAGCCGGGTTCAGAGACAAGGCCTTCAGGCAGTCGCGCAGAGCGTCGTAGTGATCGCCGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151194 lncRNA upstream 138676 25803612 ~ 25894303 (+) True G102286
TU151202 lncRNA upstream 200734 25830239 ~ 25832245 (+) True LOC122357999
XR_006252553.1 lncRNA upstream 201035 25830215 ~ 25831944 (+) False LOC122357999
TU151191 lncRNA upstream 232788 25799205 ~ 25800191 (+) True G102284
TU151095 lncRNA upstream 275486 25757175 ~ 25757493 (+) True G102212
TU151258 lncRNA downstream 2938 26038576 ~ 26040075 (+) True G102334
TU151263 lncRNA downstream 11412 26047050 ~ 26056104 (+) True G102335
TU151272 lncRNA downstream 22525 26058163 ~ 26058439 (+) True G102341
TU151277 lncRNA downstream 49742 26085380 ~ 26090260 (+) True G102344
TU151282 lncRNA downstream 58207 26093845 ~ 26126060 (+) True G102348
XM_043257698.1 mRNA upstream 26933 26003920 ~ 26006046 (+) True nr0b2a
XM_043257675.1 mRNA upstream 34688 25990764 ~ 25998291 (+) True LOC122357970
XM_043257692.1 mRNA upstream 41961 25981040 ~ 25991018 (+) True LOC122357982
XM_043257677.1 mRNA upstream 52497 25957664 ~ 25980482 (+) False LOC122357971
XM_043257676.1 mRNA upstream 52497 25957666 ~ 25980482 (+) True LOC122357971
XM_043257699.1 mRNA downstream 33289 26068927 ~ 26074927 (+) False LOC122357988
XM_043257700.1 mRNA downstream 35752 26071390 ~ 26074927 (+) True LOC122357988
XM_043257691.1 mRNA downstream 41267 26076905 ~ 26088981 (+) True azi2
XM_043257690.1 mRNA downstream 41295 26076933 ~ 26088981 (+) False azi2
XM_043257679.1 mRNA downstream 80577 26116215 ~ 26121752 (+) False eomesb
unassigned_transcript_1961 other upstream 1804731 24228177 ~ 24228248 (+) True trnae-uuc_32
TU150835 other upstream 1816216 24216243 ~ 24216763 (+) True G102017
TU150815 other upstream 1943457 24086724 ~ 24089522 (+) True tmem35
unassigned_transcript_1960 other upstream 1981204 24051703 ~ 24051775 (+) True trnav-uac_6
XR_006252531.1 other upstream 3723867 22282292 ~ 22309112 (+) False gria2b
TU151318 other downstream 132920 26168558 ~ 26171402 (+) False gnrhr3
XR_006252567.1 other downstream 338695 26374333 ~ 26383634 (+) False khdc4

Expression Profile