RNA id: TU95704



Basic Information


Item Value
RNA id TU95704
length 338
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id LOC122350953
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 17320376 ~ 17401228 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATAGCTTTAATTCCCAGGCAGTCAGGATACGTTCAGATATATACAGCAGAGCTTTGTCAGGACTCTGAGGATCTCACTAGCTGTTTGGTTTAGATTACTGTCCACGTCTGGATTGGGAGGTGTAATGTTATCCAGATAACAAATCAGCAGTGTGTTCTACATTGGGTCACATTGAGACTTTTCTGCACTGAGCAGCAAAACCCTCCAGCTCTGGATCTGAGGAAGTCGTCAGCAGACGTTACTGAAGACATGGAGGACTGTAAGAATGAGTGTCAGAAGGAGTTGGCCAGCATGCTGAGCTGCTTTTTCGGTTTGGTCACCGGCTCTTTTGCCAGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95610 lncRNA downstream 267054 17046888 ~ 17053322 (-) False LOC122350945
TU95612 lncRNA downstream 275405 17044454 ~ 17044971 (-) True G64634
TU95543 lncRNA downstream 629862 16651558 ~ 16690514 (-) True G64582
TU95565 lncRNA downstream 636573 16683237 ~ 16683803 (-) True G64599
TU95512 lncRNA downstream 658965 16558068 ~ 16661411 (-) True G64556
XR_006251657.1 lncRNA upstream 1504 17322476 ~ 17343705 (-) True LOC122350953
TU95712 lncRNA upstream 38464 17359436 ~ 17361850 (-) False zgc:194007
TU95713 lncRNA upstream 38464 17359436 ~ 17361850 (-) False zgc:194007
TU95714 lncRNA upstream 38464 17359436 ~ 17361850 (-) False zgc:194007
XR_006251571.1 lncRNA upstream 41197 17362169 ~ 17365510 (-) False LOC122350118
XM_043247728.1 mRNA downstream 223581 17046467 ~ 17096795 (-) False LOC122350945
XM_043247729.1 mRNA downstream 223585 17046467 ~ 17096791 (-) True LOC122350945
XM_043247727.1 mRNA downstream 223586 17046467 ~ 17096790 (-) False LOC122350945
XM_043247402.1 mRNA downstream 484816 16763297 ~ 16835560 (-) True LOC122350717
XM_043247401.1 mRNA downstream 912978 16398576 ~ 16407398 (-) True LOC122350716
XM_043246317.1 mRNA upstream 38413 17359385 ~ 17361850 (-) False zgc:194007
XM_043247412.1 mRNA upstream 135170 17456142 ~ 17464579 (-) True rflna
XM_043246070.1 mRNA upstream 219854 17540826 ~ 17543078 (-) True prnpa
XM_043247723.1 mRNA upstream 231548 17552520 ~ 17567609 (-) True rassf2a
XM_043247724.1 mRNA upstream 231548 17552520 ~ 17563121 (-) False rassf2a
TU95424 other downstream 910712 16407834 ~ 16409664 (-) False LOC122350093
XR_006251609.1 other downstream 1619480 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other downstream 1619480 15656919 ~ 15700896 (-) False mvb12bb
TU95181 other downstream 2036246 15283861 ~ 15284130 (-) True G64353
TU95023 other downstream 2538666 14779531 ~ 14781710 (-) True G64228
TU95703 other upstream 2088 17323060 ~ 17343739 (-) False LOC122350953
TU95705 other upstream 4072 17325044 ~ 17401228 (-) False LOC122350953
XR_006251564.1 other upstream 38413 17359385 ~ 17361850 (-) False zgc:194007
XR_006251566.1 other upstream 38413 17359385 ~ 17361850 (-) False zgc:194007
XR_006251565.1 other upstream 38413 17359385 ~ 17361850 (-) True zgc:194007

Expression Profile