RNA id: TCONS_00060206


Basic Information

Item Value
RNA id TCONS_00060206
length 621
RNA type processed_transcript
GC content 0.38
exon number 2
gene id XLOC_030985
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 21736359 ~ 21737345 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

cTAAAACCCTTTTTTTATCAGGAACTTccttcttccaccattcatttacatctgcagctgacgtcaaaataGCAGAAGCCGTTAATAATTccccaacgtcactttagagctatatTTGAATGACTCTGTCTAAAGTGttgacaaaactgctgattttgcttTCTTTTTAAGATAATGCTGAACGTGAGATGAAATGCCATCCATTTAcagagaaattggggaaaaaaataaacagggggctaataattctgacttcaactgtatatgcatatgtatatgtataaactgttattcatatggaaatttatattaaaaattctATAATATGCTTCATGCCCCCCGGGGGTTAGAGGTTGAGAACAGGATGCAGGGGGTTTTGGGCGGCCGCTTCgatcgggtactgtaccaaagttggcaacccgggggtgttaagtttacagactgtaccaaagaggggggtAGGTGAAATTACCGGAGTTTTTTGAGGAAGAAATAAAAATGTGATGTTTGCGGGAGACTTGTCTGAAATACGAAATACtcccattaaaaaaaatgaagtgttggctggtgtgcttaccagtttaatattgatttgatctgctatagttagaaatcagactg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000147155

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00061981 lncRNA downstream 494275 21239333 ~ 21242084 (-) True XLOC_030981
TCONS_00061980 lncRNA downstream 1117020 20616071 ~ 20619339 (-) True XLOC_030973
TCONS_00061979 lncRNA downstream 1121739 20600387 ~ 20614620 (-) True XLOC_030972
TCONS_00061978 lncRNA downstream 1315988 20416722 ~ 20420371 (-) True XLOC_030969
TCONS_00061977 lncRNA downstream 1316500 20416722 ~ 20419859 (-) False XLOC_030969
TCONS_00061983 lncRNA upstream 19312 21756657 ~ 21852215 (-) False XLOC_030984
TCONS_00061984 lncRNA upstream 60595 21797940 ~ 21852215 (-) False XLOC_030984
TCONS_00061985 lncRNA upstream 74740 21812085 ~ 21852215 (-) False XLOC_030984
TCONS_00061986 lncRNA upstream 81601 21818946 ~ 21852215 (-) True XLOC_030984
TCONS_00060208 lncRNA upstream 122353 21859698 ~ 21860343 (-) False XLOC_030986
TCONS_00060205 mRNA downstream 212108 21296567 ~ 21524251 (-) False XLOC_030983
TCONS_00060204 mRNA downstream 212108 21296567 ~ 21524251 (-) True XLOC_030983
TCONS_00060203 mRNA downstream 313969 21295747 ~ 21422390 (-) False XLOC_030983
TCONS_00060201 mRNA downstream 671265 21059459 ~ 21065094 (-) True XLOC_030980
TCONS_00060200 mRNA downstream 691666 21033771 ~ 21044693 (-) True XLOC_030979
TCONS_00060207 mRNA upstream 115369 21852714 ~ 21888368 (-) False XLOC_030986
TCONS_00060210 mRNA upstream 202388 21939733 ~ 22001053 (-) False XLOC_030988
TCONS_00060211 mRNA upstream 203581 21940926 ~ 21970881 (-) False XLOC_030988
TCONS_00060213 mRNA upstream 214536 21951881 ~ 22001003 (-) True XLOC_030988
TCONS_00060214 mRNA upstream 274230 22011575 ~ 22019061 (-) True XLOC_030989
TCONS_00060202 other downstream 443114 21293130 ~ 21293245 (-) True XLOC_030982
TCONS_00060189 other downstream 1290686 20444226 ~ 20445673 (-) False XLOC_030970
TCONS_00060188 other downstream 1290686 20444226 ~ 20445673 (-) True XLOC_030970
TCONS_00060186 other downstream 1327407 20408836 ~ 20408952 (-) True XLOC_030968
TCONS_00060180 other downstream 1615335 20116201 ~ 20121024 (-) True XLOC_030962
TCONS_00060212 other upstream 206037 21943382 ~ 21952134 (-) False XLOC_030988
TCONS_00060221 other upstream 350311 22087656 ~ 22096908 (-) True XLOC_030993
TCONS_00060223 other upstream 497062 22234407 ~ 22234505 (-) True XLOC_030995
TCONS_00060225 other upstream 698441 22435786 ~ 22437983 (-) False XLOC_030997
TCONS_00060226 other upstream 699966 22437311 ~ 22438595 (-) True XLOC_030997

Expression Profile

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