Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00060212 |
| length | 679 |
| RNA type | processed_transcript |
| GC content | 0.46 |
| exon number | 4 |
| gene id | XLOC_030988 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007116.7 |
| NCBI id | CM002889.2 |
| chromosome length | 72500376 |
| location | 21939733 ~ 22001053 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005085 | guanyl-nucleotide exchange factor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070705-271 | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be located in cytoplasm and postsynaptic density. Is expressed in retinal ganglion cell layer. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 8. Orthologous to human ARHGEF9 (Cdc42 guanine nucleotide exchange factor 9). |
| ensembl_id | ENSDART00000142199 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00061988 | lncRNA | downstream | 9104 | 21926822 ~ 21934278 (-) | True | XLOC_030987 |
| TCONS_00061987 | lncRNA | downstream | 9889 | 21926822 ~ 21933493 (-) | False | XLOC_030987 |
| TCONS_00060209 | lncRNA | downstream | 63155 | 21868178 ~ 21880227 (-) | True | XLOC_030986 |
| TCONS_00060208 | lncRNA | downstream | 83039 | 21859698 ~ 21860343 (-) | False | XLOC_030986 |
| TCONS_00061982 | lncRNA | downstream | 91155 | 21609358 ~ 21852227 (-) | False | XLOC_030984 |
| TCONS_00060217 | lncRNA | upstream | 88143 | 22040277 ~ 22041856 (-) | False | XLOC_030991 |
| TCONS_00060218 | lncRNA | upstream | 88143 | 22040277 ~ 22045634 (-) | True | XLOC_030991 |
| TCONS_00060220 | lncRNA | upstream | 129461 | 22081595 ~ 22082807 (-) | True | XLOC_030992 |
| TCONS_00061989 | lncRNA | upstream | 278556 | 22230690 ~ 22235052 (-) | False | XLOC_030995 |
| TCONS_00061990 | lncRNA | upstream | 280025 | 22232159 ~ 22235158 (-) | False | XLOC_030995 |
| TCONS_00060207 | mRNA | downstream | 55014 | 21852714 ~ 21888368 (-) | False | XLOC_030986 |
| TCONS_00060205 | mRNA | downstream | 419131 | 21296567 ~ 21524251 (-) | False | XLOC_030983 |
| TCONS_00060204 | mRNA | downstream | 419131 | 21296567 ~ 21524251 (-) | True | XLOC_030983 |
| TCONS_00060203 | mRNA | downstream | 520992 | 21295747 ~ 21422390 (-) | False | XLOC_030983 |
| TCONS_00060201 | mRNA | downstream | 878288 | 21059459 ~ 21065094 (-) | True | XLOC_030980 |
| TCONS_00060214 | mRNA | upstream | 59441 | 22011575 ~ 22019061 (-) | True | XLOC_030989 |
| TCONS_00060215 | mRNA | upstream | 69008 | 22021142 ~ 22027357 (-) | True | XLOC_030990 |
| TCONS_00060216 | mRNA | upstream | 75454 | 22027588 ~ 22052852 (-) | False | XLOC_030991 |
| TCONS_00060219 | mRNA | upstream | 121576 | 22073710 ~ 22082918 (-) | False | XLOC_030992 |
| TCONS_00060222 | mRNA | upstream | 163116 | 22115250 ~ 22130937 (-) | True | XLOC_030994 |
| TCONS_00060206 | other | downstream | 206037 | 21736359 ~ 21737345 (-) | True | XLOC_030985 |
| TCONS_00060202 | other | downstream | 650137 | 21293130 ~ 21293245 (-) | True | XLOC_030982 |
| TCONS_00060189 | other | downstream | 1497709 | 20444226 ~ 20445673 (-) | False | XLOC_030970 |
| TCONS_00060188 | other | downstream | 1497709 | 20444226 ~ 20445673 (-) | True | XLOC_030970 |
| TCONS_00060186 | other | downstream | 1534430 | 20408836 ~ 20408952 (-) | True | XLOC_030968 |
| TCONS_00060221 | other | upstream | 135522 | 22087656 ~ 22096908 (-) | True | XLOC_030993 |
| TCONS_00060223 | other | upstream | 282273 | 22234407 ~ 22234505 (-) | True | XLOC_030995 |
| TCONS_00060225 | other | upstream | 483652 | 22435786 ~ 22437983 (-) | False | XLOC_030997 |
| TCONS_00060226 | other | upstream | 485177 | 22437311 ~ 22438595 (-) | True | XLOC_030997 |
| TCONS_00060254 | other | upstream | 1270567 | 23222701 ~ 23222819 (-) | True | XLOC_031012 |
