RNA id: TU92209



Basic Information


Item Value
RNA id TU92209
length 288
RNA type TUCP
GC content 0.51
exon number 1
gene id G73833
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37325020 ~ 37325307 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atcaaagggacgatggacggggccatgtaccgtcaaatcttgggcgagaacctccttccctcagccagggcattgaaaatgggtcgtggatgggtattccagcatgacaatgacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttgccaaacatcagcctcgaaaccttaatgacttggagaggatctgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92178 lncRNA downstream 151849 37172930 ~ 37173171 (-) True G73803
TU92141 lncRNA downstream 308847 37015950 ~ 37016173 (-) True G73776
TU92083 lncRNA downstream 594459 36689357 ~ 36730561 (-) True G73722
TU92063 lncRNA downstream 672977 36646059 ~ 36652043 (-) True G73704
TU92025 lncRNA downstream 849072 36474243 ~ 36475948 (-) True G73667
TU92228 lncRNA upstream 192736 37518043 ~ 37518331 (-) True G73851
TU92230 lncRNA upstream 206163 37531470 ~ 37531976 (-) True G73853
TU92234 lncRNA upstream 248431 37573738 ~ 37574140 (-) True G73857
TU92243 lncRNA upstream 256459 37581766 ~ 37582162 (-) True G73866
TU92288 lncRNA upstream 357932 37683239 ~ 37683542 (-) True G73908
AMCG00014858 mRNA downstream 15203 37302224 ~ 37309817 (-) True AMCG00014858
AMCG00014854 mRNA downstream 209354 37080157 ~ 37115666 (-) True AMCG00014854
AMCG00014856 mRNA downstream 251252 37068871 ~ 37073768 (-) True AMCG00014856
AMCG00014855 mRNA downstream 277541 37044210 ~ 37047479 (-) True AMCG00014855
AMCG00014851 mRNA downstream 380281 36931007 ~ 36944739 (-) True AMCG00014851
AMCG00014859 mRNA upstream 92226 37417533 ~ 37421167 (-) True AMCG00014859
AMCG00014861 mRNA upstream 229582 37554889 ~ 37558209 (-) True AMCG00014861
AMCG00014860 mRNA upstream 277165 37602472 ~ 37616362 (-) True AMCG00014860
AMCG00014865 mRNA upstream 476787 37802094 ~ 37864483 (-) True AMCG00014865
AMCG00014866 mRNA upstream 546099 37871406 ~ 37887963 (-) True AMCG00014866
TU92007 other downstream 931527 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 1070833 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 1142669 36101358 ~ 36182351 (-) True G73604
TU91914 other downstream 1716343 35580626 ~ 35608677 (-) True AMCG00014839
TU91607 other downstream 2555041 34769583 ~ 34769979 (-) True G73328
TU92296 other upstream 454026 37779333 ~ 37783575 (-) True G73916
TU92499 other upstream 1018015 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 1086853 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 1106956 38432263 ~ 38432875 (-) True G74115
TU92559 other upstream 1165016 38490323 ~ 38490940 (-) False AMCG00014891

Expression Profile