RNA id: TU92025



Basic Information


Item Value
RNA id TU92025
length 339
lncRNA type intronic
GC content 0.51
exon number 2
gene id G73667
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36474243 ~ 36475948 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGGACTCAAGAACTGGGGACTaacaagtgcagtgctggatcgcgggatggtcagacaggcaCGGGTTGGGTGCTGGCAGATCAGGGCAATACAGGAAACGCAGaaacgtggtcgtggtcacaggcgtTGGTCGTGGGATCAGGCGTACAGACAGGCAAAGGgggggcaaTACTtgaggggtgtactacgaagcgaggtaactggcttatccaggtaaCTTCAGGAGTAACTTTGTGAAGTTGTGTGTAACTTCCCAATTAACCCGTACTATGAAAGGTGGGTAAGTTTTTAGGCCATGTGTCCACCGAAGTCGGCGTATTATTTCAACtgtttgcaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91948 lncRNA downstream 279993 36194048 ~ 36194250 (-) True G73609
TU91945 lncRNA downstream 416785 36055996 ~ 36057458 (-) True G73606
TU91890 lncRNA downstream 631252 35434969 ~ 35842991 (-) True G73568
TU91882 lncRNA downstream 1009578 35391184 ~ 35464665 (-) True G73562
TU91864 lncRNA downstream 1051108 35340673 ~ 35423135 (-) True G73548
TU92063 lncRNA upstream 170111 36646059 ~ 36652043 (-) True G73704
TU92083 lncRNA upstream 213409 36689357 ~ 36730561 (-) True G73722
TU92141 lncRNA upstream 540002 37015950 ~ 37016173 (-) True G73776
TU92178 lncRNA upstream 696982 37172930 ~ 37173171 (-) True G73803
TU92228 lncRNA upstream 1042095 37518043 ~ 37518331 (-) True G73851
AMCG00014845 mRNA downstream 83463 36373537 ~ 36390780 (-) False AMCG00014845
AMCG00014844 mRNA downstream 141762 36173845 ~ 36332481 (-) True AMCG00014844
AMCG00014843 mRNA downstream 400935 36062619 ~ 36073308 (-) True AMCG00014843
AMCG00014840 mRNA downstream 487675 35978206 ~ 35986568 (-) True AMCG00014840
AMCG00014842 mRNA downstream 659805 35792348 ~ 35814438 (-) True AMCG00014842
AMCG00014846 mRNA upstream 63870 36539818 ~ 36570308 (-) True AMCG00014846
AMCG00014849 mRNA upstream 327284 36803232 ~ 36804839 (-) True AMCG00014849
AMCG00014851 mRNA upstream 455059 36931007 ~ 36944739 (-) True AMCG00014851
AMCG00014855 mRNA upstream 568262 37044210 ~ 37047479 (-) True AMCG00014855
AMCG00014856 mRNA upstream 592923 37068871 ~ 37073768 (-) True AMCG00014856
TU92007 other downstream 80750 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 220056 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 291892 36101358 ~ 36182351 (-) True G73604
TU91914 other downstream 865566 35580626 ~ 35608677 (-) True AMCG00014839
TU91607 other downstream 1704264 34769583 ~ 34769979 (-) True G73328
TU92209 other upstream 849072 37325020 ~ 37325307 (-) True G73833
TU92296 other upstream 1303385 37779333 ~ 37783575 (-) True G73916
TU92499 other upstream 1867374 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 1936212 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 1956315 38432263 ~ 38432875 (-) True G74115

Expression Profile