Fish Single-cell RNA Database

CELL TYPE: Eye (endothelial, progenitors)

Distribution of Eye (endothelial, progenitors) in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000091234	si:ch73-335l21.4	7: 20239915 ~ 20241413 (-)
ENSDARG00000079578	rbpms2b	7: 48252638 ~ 48263633 (-)
ENSDARG00000056795	serpine1	7: 26265584 ~ 26270014 (-)
ENSDARG00000002701	rasl12	7: 13756215 ~ 13782279 (+)
ENSDARG00000041065	hspb1	5: 3568016 ~ 3584815 (-)
ENSDARG00000011239	ppp1r14aa	5: 36730726 ~ 36739509 (+)
ENSDARG00000068036	tmem119b	5: 31872049 ~ 31875645 (-)
ENSDARG00000099411	zgc:158343	5: 9823754 ~ 9824908 (-)
ENSDARG00000015575	cyp3c1	3: 40969242 ~ 40976582 (-)
ENSDARG00000014646	aoc2	3: 32924185 ~ 32934359 (-)
ENSDARG00000105223	pmp22a	3: 50861176 ~ 50865079 (-)
ENSDARG00000059906	sdc4	6: 52663097 ~ 52675630 (-)
ENSDARG00000002644	rgs5a	6: 35387367 ~ 35439406 (-)
ENSDARG00000100003	glulb	6: 23809163 ~ 23813893 (+)
ENSDARG00000104571	gadd45ab	6: 23931236 ~ 23939154 (+)
ENSDARG00000097082	im:7152348	6: 27884372 ~ 27891961 (-)
ENSDARG00000044365	angptl3	6: 32344197 ~ 32349153 (-)
ENSDARG00000008030	myl9b	6: 1787160 ~ 1799561 (+)
ENSDARG00000035858	cnn2	2: 24548249 ~ 24554432 (-)
ENSDARG00000013576	gadd45bb	2: 36939749 ~ 36941988 (+)
ENSDARG00000017860	rgs5b	2: 6885852 ~ 6889119 (+)
ENSDARG00000005673	f3b	2: 15100742 ~ 15106968 (+)
ENSDARG00000007804	gas6	1: 312784 ~ 338445 (-)
ENSDARG00000068261	pros1	1: 343292 ~ 354166 (-)
ENSDARG00000011876	ednraa	1: 36612660 ~ 36702355 (+)
ENSDARG00000075045	cxcl18b	1: 49222164 ~ 49225890 (-)
ENSDARG00000074378	junba	1: 51732979 ~ 51734535 (-)
ENSDARG00000055009	col4a1	9: 8634229 ~ 8670158 (-)
ENSDARG00000103114	ndufa4l2a	9: 323460 ~ 327901 (-)
ENSDARG00000011473	calcrla	9: 42360679 ~ 42418470 (-)
ENSDARG00000099236	sept10	9: 55857193 ~ 55875077 (+)
ENSDARG00000008363	mcl1b	16: 29586004 ~ 29587969 (+)
ENSDARG00000099448	sh3d21	16: 35905031 ~ 35938157 (+)
ENSDARG00000056379	si:ch73-86n18.1	16: 21779920 ~ 21785261 (-)
ENSDARG00000097057	fxyd6l	16: 24601140 ~ 24642815 (-)
ENSDARG00000055398	foxc1b	20: 26702377 ~ 26704331 (+)
ENSDARG00000002745	tdh	20: 18992679 ~ 18998022 (+)
ENSDARG00000020133	jdp2b	20: 46586678 ~ 46595151 (+)
ENSDARG00000028275	sult1st1	8: 46499098 ~ 46509194 (-)
ENSDARG00000053509	kazald3	8: 42609777 ~ 42624454 (-)
ENSDARG00000042725	cebpb	8: 28448267 ~ 28449782 (-)
ENSDARG00000097256	si:ch211-270g19.5	17: 15297398 ~ 15305586 (+)
ENSDARG00000053858	crip1	17: 37385811 ~ 37395496 (-)
ENSDARG00000098293	si:dkey-27i16.2	14: 14560932 ~ 14566417 (-)
ENSDARG00000019353	sparc	14: 25937948 ~ 25956860 (-)
ENSDARG00000074869	si:ch1073-291c23.2	13: 337814 ~ 350108 (-)
ENSDARG00000015674	msx3	13: 24662238 ~ 24664668 (+)
ENSDARG00000104315	fhl3b	19: 4089494 ~ 4118375 (-)
ENSDARG00000019949	serpinh1b	15: 29382454 ~ 29388012 (-)
ENSDARG00000068257	kcne4	15: 43093044 ~ 43100399 (+)
ENSDARG00000103720	zgc:162730	15: 13984879 ~ 13986761 (+)
ENSDARG00000009822	her4.4	23: 21462021 ~ 21463788 (-)
ENSDARG00000070770	her4.3	23: 21459263 ~ 21461140 (+)
ENSDARG00000032606	sept8a	21: 43328685 ~ 43374893 (+)
ENSDARG00000094422	si:dkey-12l12.1	24: 11334733 ~ 11346871 (+)
ENSDARG00000040133	ackr4b	24: 11381400 ~ 11390669 (+)
ENSDARG00000087303	cebpd	24: 35564668 ~ 35565927 (+)
ENSDARG00000023963	tpm4a	22: 15577827 ~ 15602760 (-)
ENSDARG00000087402	tpm1	25: 33192404 ~ 33250323 (+)
--	erv	--
--	si:ch211-184m19.3	--
--	zgc:153952	--
--	tmem100b	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Eye (endothelial, progenitors).

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE158142 (15dpf)	Danio rerio	brain, eye	13	Eye (endothelial, progenitors)	baseline	15dpf, untreatment	ENSDARG00000002701 (rasl12)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (15dpf)	Danio rerio	brain, eye	13	Eye (endothelial, progenitors)	baseline	15dpf, untreatment	ENSDARG00000044365 (angptl3)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (15dpf)	Danio rerio	brain, eye	13	Eye (endothelial, progenitors)	baseline	15dpf, untreatment	ENSDARG00000040133 (ackr4b)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (15dpf)	Danio rerio	brain, eye	13	Eye (endothelial, progenitors)	baseline	15dpf, untreatment	ENSDARG00000068036 (tmem119b)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Eye (endothelial, progenitors)

Distribution of Eye (endothelial, progenitors) in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

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