DATASET ID: PRJNA415636 (heart, blood)

Basic information

Tissue / Organ heart, blood
Experiment type baseline
Sample adult, Zebrabow M, heart and blood
Source dataset ID SRR6211492
Project ID PRJNA415636
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Cardiomyocytes ENSDARG00000099870 (tnni4a) protein_coding marker DOI:10.1038/nbt.4124
    1 Cardiomyocytes ENSDARG00000019096 (myl7) protein_coding marker DOI:10.1038/nbt.4124
    1 Cardiomyocytes ENSDARG00000001950 (ak1) protein_coding marker DOI:10.1038/nbt.4124
    2 Erythroid cells ENSDARG00000097011 (hbaa1) protein_coding marker DOI:10.1038/nbt.4124
    2 Erythroid cells ENSDARG00000069735 (hbaa2) protein_coding marker DOI:10.1038/nbt.4124
    2 Erythroid cells ENSDARG00000077504 (si:ch211-103n10.5) protein_coding marker DOI:10.1038/nbt.4124
    3 Endocardial cells ENSDARG00000070266 (spock3) protein_coding marker DOI:10.1038/nbt.4124
    3 Endocardial cells ENSDARG00000045141 (aqp8a.1) protein_coding marker DOI:10.1038/nbt.4124
    4 Endocardial cells ENSDARG00000045141 (aqp8a.1) protein_coding marker DOI:10.1038/nbt.4124
    4 Endocardial cells ENSDARG00000070266 (spock3) protein_coding marker DOI:10.1038/nbt.4124
    5 Endocardial cells ENSDARG00000070266 (spock3) protein_coding marker DOI:10.1038/nbt.4124
    6 Fibroblasts ENSDARG00000006526 (fn1b) protein_coding marker DOI:10.1038/nbt.4124
    6 Fibroblasts ENSDARG00000088116 (gstm.3) protein_coding marker DOI:10.1038/nbt.4124
    7 T cells ENSDARG00000094002 (ccl34b.4) protein_coding marker DOI:10.1038/nbt.4124
    8 Cardiomyocytes ENSDARG00000090637 (myh6) protein_coding marker DOI:10.1038/nbt.4124
    8 Cardiomyocytes ENSDARG00000037539 (tnnc1b) protein_coding marker DOI:10.1038/nbt.4124
    8 Cardiomyocytes ENSDARG00000041257 (smtnl1) protein_coding marker DOI:10.1038/nbt.4124
    9 Macrophages ENSDARG00000070542 (mafbb) protein_coding marker DOI:10.1038/nbt.4124
    10 Apelin expressing cells ENSDARG00000053279 (apln) protein_coding marker DOI:10.1038/nbt.4124
    10 Apelin expressing cells ENSDARG00000039222 (mpl) protein_coding marker DOI:10.1038/nbt.4124
    10 Apelin expressing cells ENSDARG00000058557 (il11b) protein_coding marker DOI:10.1038/nbt.4124
    11 Smooth muscle cells ENSDARG00000055053 (itih1) protein_coding marker DOI:10.1038/nbt.4124
    11 Smooth muscle cells ENSDARG00000039273 (fbln5) protein_coding marker DOI:10.1038/nbt.4124
    11 Smooth muscle cells ENSDARG00000089187 (wfdc2) protein_coding marker DOI:10.1038/nbt.4124
    12 Fibroblasts ENSDARG00000027582 (angptl7) protein_coding marker DOI:10.1038/nbt.4124
    12 Fibroblasts ENSDARG00000068275 (ptx3a) protein_coding marker DOI:10.1038/nbt.4124
    12 Fibroblasts ENSDARG00000104340 (rspo1) protein_coding marker DOI:10.1038/nbt.4124
    12 Fibroblasts ENSDARG00000086189 (mgp) protein_coding marker DOI:10.1038/nbt.4124
    13 B cells ENSDARG00000074014 (zgc:194275) protein_coding marker DOI:10.1038/nbt.4124
    13 B cells -- (zgc:153659.1) -- marker DOI:10.1038/nbt.4124
    13 B cells ENSDARG00000093272 (igic1s1) protein_coding marker DOI:10.1038/nbt.4124
    13 B cells ENSDARG00000057633 (cxcr4a) protein_coding marker DOI:10.1038/nbt.4124
    14 Granule cells ENSDARG00000057789 (lyz) protein_coding marker DOI:10.1038/nbt.4124
    14 Granule cells ENSDARG00000033227 (lect2l) protein_coding marker DOI:10.1038/nbt.4124
    14 Granule cells ENSDARG00000101479 (BX908782.2) protein_coding marker DOI:10.1038/nbt.4124
    14 Granule cells ENSDARG00000010423 (npsn) protein_coding marker DOI:10.1038/nbt.4124
    14 Granule cells ENSDARG00000093124 (scpp8) protein_coding marker DOI:10.1038/nbt.4124

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)