Fish Single-cell RNA Database

GENE ID: ENSDARG00000019096

Symbol	Location	Gene type	Genome version	Species
myl7	8: 40457107 ~ 40464935 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000019096 (myl7), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000010784	ppp1r12a	4: 21488990 ~ 21584158 (-)
ENSDARG00000076348	mylk3	7: 41821311 ~ 41858513 (-)
ENSDARG00000032976	cmlc1	5: 64167620 ~ 64168415 (-)
ENSDARG00000014309	spaw	5: 68878124 ~ 68885081 (+)
ENSDARG00000009418	mef2cb	5: 48179340 ~ 48307804 (-)
ENSDARG00000001014	myh9b	3: 5102656 ~ 5228841 (-)
ENSDARG00000063295	myh9a	6: 7735806 ~ 7776612 (-)
ENSDARG00000009782	myh11a	6: 8499865 ~ 8580858 (-)
ENSDARG00000000103	myh10	6: 7553085 ~ 7658285 (+)
ENSDARG00000004753	mylkb	6: 13458257 ~ 13498745 (-)
ENSDARG00000052423	ppp1r12c	6: 21588205 ~ 21616659 (-)
ENSDARG00000103589	gata6	2: 4207209 ~ 4217887 (+)
ENSDARG00000091260	mylk4a	2: 394166 ~ 424925 (+)
ENSDARG00000079564	myh7	2: 24252987 ~ 24270062 (-)
ENSDARG00000079782	myh7l	2: 24274293 ~ 24289726 (-)
ENSDARG00000008305	hand2	1: 38193147 ~ 38195012 (-)
ENSDARG00000034801	mylka	9: 4024250 ~ 4075620 (-)
ENSDARG00000004877	rock2b	20: 33601046 ~ 33705044 (-)
ENSDARG00000098952	gata4	20: 52952116 ~ 52967878 (-)
ENSDARG00000090637	myh6	20: 53577502 ~ 53583436 (+)
ENSDARG00000021232	nkx2.7	8: 50284859 ~ 50287949 (-)
ENSDARG00000019096	myl7	8: 40457107 ~ 40464935 (-)
ENSDARG00000052960	nppa	8: 48613040 ~ 48617664 (+)
ENSDARG00000018004	nkx2.5	14: 24241241 ~ 24244034 (+)
ENSDARG00000105215	kdrl	14: 32983769 ~ 33044955 (-)
ENSDARG00000012788	foxa3	18: 46350574 ~ 46354269 (-)
ENSDARG00000054632	fli1a	18: 48423973 ~ 48487875 (+)
ENSDARG00000031698	mylk2	23: 32039386 ~ 32060885 (+)
ENSDARG00000036930	tbx18	23: 31107685 ~ 31118371 (+)
ENSDARG00000020610	tnnt2a	23: 5653224 ~ 5685172 (-)
ENSDARG00000033738	zgc:153867	23: 28374458 ~ 28388513 (+)
ENSDARG00000017821	gata5	23: 7379728 ~ 7391028 (+)
ENSDARG00000076075	myh7ba	11: 25181886 ~ 25213689 (-)
ENSDARG00000013422	slc8a1a	11: 30535943 ~ 30612166 (-)
ENSDARG00000091726	aebp1	10: 2807136 ~ 2838190 (+)
ENSDARG00000114031	smyhc3	24: 40712794 ~ 40726073 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	Heart primordium (cluster: 18)	marker	DOI:10.1016/j.neuron.2020.09.023
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury	Heart primordium (cluster: 2)	marker	DOI:10.15252/embr.202152901
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury	Heart primordium (cluster: 2)	marker	DOI:10.15252/embr.202152901
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	Heart primordium (cluster: 10)	marker	DOI:10.15252/embr.202152901
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury	Heart primordium (cluster: 7)	marker	DOI:10.15252/embr.202152901
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	Heart primordium (cluster: 5)	marker	DOI:10.15252/embr.202152901
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury	Heart primordium (cluster: 4)	marker	DOI:10.15252/embr.202152901
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood	Cardiomyocytes (cluster: 1)	marker	DOI:10.1038/nbt.4124
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	Differentiated art.CMs (cluster: 2)	potential marker	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	Differentiated art.ventricle (cluster: 4)	potential marker	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	Cardiac mesoderm (cluster: 5)	potential marker	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	Heart primordium (cluster: 30)	potential marker	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	Pectoral fin (cluster: 9)	potential marker	NA
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (14hpf)	embryo	baseline	14hpf, FACS sorted sox10:nEOS cells
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
GSE158142 (2dpf)	head	baseline	2dpf, untreatment
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
GSE158142 (24hpf)	head	baseline	24hpf, untreatment
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000019096

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences