DATASET ID: GSE144944 (fgfr3 -|-)

Basic information

Tissue / Organ cranial vault
Experiment type growth
Sample 1mpf, fgfr3 -/-
Source dataset ID GSM4301250
Project ID GSE144944
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Osteoblast ENSDARG00000043806 (postna) protein_coding marker DOI:10.1002/jbmr.4042
    1 Osteoblast ENSDARG00000093303 (ifitm1) protein_coding marker DOI:10.1002/jbmr.4042
    2 Chondrocytes ENSDARG00000011407 (col2a1b) protein_coding marker DOI:10.1002/jbmr.4042
    3 Osteoblast ENSDARG00000043806 (postna) protein_coding marker DOI:10.1002/jbmr.4042
    3 Osteoblast ENSDARG00000093303 (ifitm1) protein_coding marker DOI:10.1002/jbmr.4042
    4 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    4 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1038/nature25969
    5 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1002/jbmr.4042
    5 Epidermal cells ENSDARG00000040534 (epcam) protein_coding marker DOI:10.1002/jbmr.4042
    6 Chondrocytes ENSDARG00000011407 (col2a1b) protein_coding marker DOI:10.1002/jbmr.4042
    7 Osteoblast ENSDARG00000019516 (sp7) protein_coding marker DOI:10.1002/jbmr.4042
    7 Osteoblast ENSDARG00000044276 (spp1) protein_coding marker DOI:10.1002/jbmr.4042
    7 Osteoblast ENSDARG00000058414 (bglap) protein_coding marker DOI:10.1002/jbmr.4042
    7 Osteoblast ENSDARG00000101535 (col10a1b) protein_coding marker DOI:10.1002/jbmr.4042
    8 Epidermal cells ENSDARG00000040534 (epcam) protein_coding marker DOI:10.1002/jbmr.4042
    8 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1002/jbmr.4042
    9 Central support cells ENSDARG00000009094 (gata2b) protein_coding marker DOI:10.1002/jbmr.4042
    11 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    11 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1038/nature25969
    12 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1002/jbmr.4042
    12 Epidermal cells ENSDARG00000040534 (epcam) protein_coding marker DOI:10.1002/jbmr.4042
    14 Oligodendrocytes ENSDARG00000036186 (mbpa) protein_coding marker DOI:10.1002/jbmr.4042
    15 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1002/jbmr.4042
    15 Epidermal cells ENSDARG00000040534 (epcam) protein_coding marker DOI:10.1002/jbmr.4042
    16 Periderm cells ENSDARG00000057437 (apodb) protein_coding marker DOI:10.1002/jbmr.4042
    17 Neuron ENSDARG00000077799 (egr4) protein_coding marker DOI:10.1002/jbmr.4042
    19 Pigment cells ENSDARG00000003732 (mitfa) protein_coding marker DOI:10.1002/jbmr.4042
    19 Pigment cells ENSDARG00000057575 (pnp4a) protein_coding marker DOI:10.1002/jbmr.4042
    19 Pigment cells ENSDARG00000062688 (gpnmb) protein_coding marker DOI:10.1002/jbmr.4042
    20 Immune cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1016/j.celrep.2019.04.030
    20 Immune cells ENSDARG00000041959 (cxcr4b) protein_coding marker DOI:10.1038/nature25969

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)