Fish Single-cell RNA Database

GENE ID: ENSDARG00000004256

Symbol	Location	Gene type	Genome version	Species
wnt11f2	5: 36513605 ~ 36520117 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000004256 (wnt11f2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000005541	wif1	4: 12931763 ~ 12956718 (+)
ENSDARG00000069185	celsr1a	4: 28190013 ~ 28335184 (-)
ENSDARG00000027397	vangl2	7: 5324061 ~ 5375214 (-)
ENSDARG00000004256	wnt11f2	5: 36513605 ~ 36520117 (+)
ENSDARG00000035521	sfrp1a	5: 27488975 ~ 27538745 (+)
ENSDARG00000031891	tbx1	5: 15202495 ~ 15215483 (+)
ENSDARG00000054438	fzd2	3: 31621774 ~ 31624213 (+)
ENSDARG00000031126	notum1a	3: 57948377 ~ 57979190 (+)
ENSDARG00000088411	notum2	6: 10943188 ~ 10964083 (-)
ENSDARG00000027589	fzd7b	6: 9703721 ~ 9707599 (-)
ENSDARG00000007231	ryk	6: 27514465 ~ 27615701 (+)
ENSDARG00000038569	fzd8b	2: 47955160 ~ 47957673 (-)
ENSDARG00000036471	dand5	1: 51827046 ~ 51829291 (+)
ENSDARG00000070050	sfrp2	1: 25491324 ~ 25496133 (-)
ENSDARG00000025420	fzd5	9: 28232522 ~ 28234444 (+)
ENSDARG00000018383	frzb	9: 44832032 ~ 44839148 (+)
ENSDARG00000060004	fzd7a	9: 13352308 ~ 13355071 (-)
ENSDARG00000006467	pcdh8	9: 53654866 ~ 53666031 (-)
ENSDARG00000106062	fzd1	16: 53917415 ~ 53919115 (-)
ENSDARG00000104874	fzd6	16: 54513267 ~ 54521652 (+)
ENSDARG00000021664	fzd3a	20: 35208855 ~ 35246150 (-)
ENSDARG00000068213	fzd10	8: 44295983 ~ 44298964 (-)
ENSDARG00000007329	tbx16	8: 51733907 ~ 51753604 (-)
ENSDARG00000053194	pdzd11	14: 33264303 ~ 33268494 (+)
ENSDARG00000015472	gpc4	14: 31090151 ~ 31151148 (-)
ENSDARG00000004460	desi2	13: 11550454 ~ 11570568 (+)
ENSDARG00000039041	sfrp5	13: 39911551 ~ 39947335 (-)
ENSDARG00000089563	sfrp2l	15: 47811725 ~ 47822597 (-)
ENSDARG00000057678	sfrp1b	10: 20351413 ~ 20357013 (-)
ENSDARG00000045444	fzd8a	24: 4447635 ~ 4450238 (-)
ENSDARG00000040649	prickle1a	25: 314608 ~ 348784 (-)
ENSDARG00000099637	szl	25: 371164 ~ 375882 (-)
ENSDARG00000104117	fzd4	KN150617.1: 66381 ~ 79211 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	Dorsal margin (cluster: 2)	potential marker	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	Ventral (cluster: 3)	potential marker	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	Skeletal muscle cells (cluster: 19)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells
PRJNA706197 (1.25dpf)	embryo	baseline	1.25dpf, FACS sorted sox10:nEOS cells
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos
PRJNA706197 (14hpf)	embryo	baseline	14hpf, FACS sorted sox10:nEOS cells
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
PRJNA706197 (12hpf)	embryo	baseline	12hpf, FACS sorted sox10:nEOS cells
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000004256

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences