Fish Single-cell RNA Database

GENE ID: ENSDARG00000035606

Symbol	Location	Gene type	Genome version	Species
aldh3b2	5: 19477555 ~ 19488134 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000035606 (aldh3b2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000035606	aldh3b2	5: 19477555 ~ 19488134 (+)
ENSDARG00000035257	akr1a1a	5: 41521043 ~ 41531629 (-)
ENSDARG00000037935	aldh16a1	3: 32080403 ~ 32098515 (+)
ENSDARG00000006031	abat	3: 27832500 ~ 27880229 (-)
ENSDARG00000014646	aoc2	3: 32924185 ~ 32934359 (-)
ENSDARG00000027419	gad1b	6: 3827751 ~ 3863452 (+)
ENSDARG00000052030	akr1a1b	6: 33918813 ~ 33925432 (-)
ENSDARG00000022213	uck2b	2: 6051916 ~ 6065416 (-)
ENSDARG00000055370	zgc:163121	2: 27877908 ~ 27900535 (-)
ENSDARG00000005525	acy3.2	1: 52489962 ~ 52498146 (-)
ENSDARG00000093003	acy3.1	1: 52499412 ~ 52505279 (-)
ENSDARG00000036967	smox	1: 41849152 ~ 41865986 (+)
ENSDARG00000023712	mao	9: 33660964 ~ 33725972 (-)
ENSDARG00000093411	gad1a	9: 3621968 ~ 3653271 (-)
ENSDARG00000022730	aasdh	20: 25645459 ~ 25659372 (+)
ENSDARG00000015337	comta	8: 8459192 ~ 8480579 (+)
ENSDARG00000043403	paox1	8: 15239549 ~ 15250265 (+)
ENSDARG00000006074	uck2a	8: 21114338 ~ 21133119 (+)
ENSDARG00000011521	upb1	8: 30699429 ~ 30730675 (+)
ENSDARG00000044142	acss1	17: 25833947 ~ 25853922 (+)
ENSDARG00000087262	zgc:63568	14: 35892802 ~ 35900420 (+)
ENSDARG00000088366	zgc:77938	14: 35901249 ~ 35911982 (+)
ENSDARG00000091211	adh8a	13: 12653975 ~ 12660318 (-)
ENSDARG00000099579	aldh18a1	12: 30788912 ~ 30810171 (+)
ENSDARG00000042620	gstr	19: 770300 ~ 776076 (+)
ENSDARG00000003931	cndp2	19: 20801060 ~ 20823099 (+)
ENSDARG00000037781	acss2	23: 9230431 ~ 9291892 (+)
ENSDARG00000025679	comtb	11: 25619892 ~ 25631442 (+)
ENSDARG00000092976	si:ch211-127i16.2	10: 19427474 ~ 19523752 (-)
ENSDARG00000015537	gad2	24: 6133147 ~ 6158933 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000035606

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences