Fish Single-cell RNA Database

GENE ID: ENSDARG00000035350

Symbol	Location	Gene type	Genome version	Species
ins	5: 37854685 ~ 37857696 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000035350 (ins), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000013000	ppfia2	4: 21962316 ~ 22207873 (-)
ENSDARG00000094132	igf1	4: 17310143 ~ 17326717 (+)
ENSDARG00000054931	ppp2r5b	7: 25049577 ~ 25100304 (+)
ENSDARG00000034434	igf1rb	7: 15446229 ~ 15610129 (+)
ENSDARG00000035350	ins	5: 37854685 ~ 37857696 (+)
ENSDARG00000054239	ghrl	6: 40437987 ~ 40439615 (+)
ENSDARG00000079158	thpo	2: 17055069 ~ 17072559 (+)
ENSDARG00000014190	sst2	2: 5726353 ~ 5728843 (-)
ENSDARG00000011948	insra	2: 37544951 ~ 37632896 (-)
ENSDARG00000034785	dachb	1: 10378706 ~ 10496809 (+)
ENSDARG00000033138	lyrm2	20: 1196386 ~ 1199009 (+)
ENSDARG00000027017	ppp2r5a	20: 13175379 ~ 13311918 (+)
ENSDARG00000015228	ero1a	17: 15018219 ~ 15029639 (-)
ENSDARG00000059083	ppp2r5ca	17: 956821 ~ 981781 (+)
ENSDARG00000030224	ppp2ca	14: 49118860 ~ 49133426 (-)
ENSDARG00000069118	ppp2r5eb	13: 37421333 ~ 37465542 (-)
ENSDARG00000014428	ppp2r5d	13: 4232568 ~ 4303641 (-)
ENSDARG00000039756	prop1	13: 8677166 ~ 8683552 (+)
ENSDARG00000027423	igf1ra	18: 20881462 ~ 21047580 (-)
ENSDARG00000071306	gip	12: 20662426 ~ 20665865 (-)
ENSDARG00000032430	ppp2r1bb	15: 21744680 ~ 21772839 (+)
ENSDARG00000103762	rln1	21: 271957 ~ 275377 (-)
ENSDARG00000099241	ppp2cb	10: 7593185 ~ 7617748 (+)
ENSDARG00000002779	pdx1	24: 21684189 ~ 21686706 (+)
ENSDARG00000071524	insrb	22: 10927370 ~ 11054244 (-)
ENSDARG00000079296	gcga	22: 11617520 ~ 11626018 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	Bi-hormonal endocrine cells (cluster: 2)	marker	DOI:10.1038/nbt.4124
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	Pancreas endocrine cells (cluster: 2)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000035350

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences