Fish Single-cell RNA Database

GENE ID: ENSDARG00000041926

Symbol	Location	Gene type	Genome version	Species
dlg4a	5: 68529728 ~ 68641353 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000041926 (dlg4a), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000078650	kcna4	7: 32595981 ~ 32599669 (-)
ENSDARG00000077329	nlgn2a	7: 21940857 ~ 22132265 (-)
ENSDARG00000016739	lrrc4cb	7: 50053339 ~ 50113581 (+)
ENSDARG00000078078	lrfn4b	7: 60551133 ~ 60598313 (+)
ENSDARG00000068910	nos1	5: 12100126 ~ 12272689 (-)
ENSDARG00000002986	gda	5: 25708369 ~ 25723079 (-)
ENSDARG00000025728	grin1b	5: 29597645 ~ 29643930 (-)
ENSDARG00000041926	dlg4a	5: 68529728 ~ 68641353 (-)
ENSDARG00000032565	cacng2a	3: 29714775 ~ 29845175 (+)
ENSDARG00000034493	grin2aa	3: 27071749 ~ 27277695 (+)
ENSDARG00000060539	shank1	3: 30714111 ~ 30861177 (-)
ENSDARG00000079348	NA	3: 1303862 ~ 1317290 (-)
ENSDARG00000068110	CABZ01079818.1	3: 196316 ~ 214709 (-)
ENSDARG00000102216	dlg1l	2: 4900213 ~ 5074812 (-)
ENSDARG00000014280	dlgap1a	2: 29491314 ~ 29692825 (+)
ENSDARG00000063207	erbb4a	1: 6817292 ~ 6925407 (+)
ENSDARG00000030376	grin2bb	1: 45372562 ~ 45553602 (-)
ENSDARG00000077761	nlgn4xb	9: 55321322 ~ 55418196 (+)
ENSDARG00000069765	syngap1b	16: 45456066 ~ 45691220 (+)
ENSDARG00000070688	ncalda	16: 9833256 ~ 9897769 (-)
ENSDARG00000060532	adam22	16: 43152727 ~ 43284939 (+)
ENSDARG00000077489	lrfn2b	20: 25370 ~ 76300 (+)
ENSDARG00000060368	syn1	8: 31119548 ~ 31148319 (+)
ENSDARG00000110528	sypa	8: 22930627 ~ 22953964 (+)
ENSDARG00000059340	dlgap2a	17: 24936059 ~ 25175560 (+)
ENSDARG00000104786	nlgn3a	14: 14224730 ~ 14534457 (+)
ENSDARG00000076796	dlg3	14: 33070284 ~ 33177997 (-)
ENSDARG00000063332	shank3a	18: 7663802 ~ 8030073 (-)
ENSDARG00000077560	grin2cb	12: 31909346 ~ 32013125 (-)
ENSDARG00000058421	lgi1b	12: 5189776 ~ 5204629 (+)
ENSDARG00000063713	syngap1a	19: 232536 ~ 276802 (+)
ENSDARG00000055459	dlgap3	19: 37458610 ~ 37492517 (+)
ENSDARG00000040627	grik1b	15: 42599501 ~ 42679838 (+)
ENSDARG00000027828	grin1a	21: 11468642 ~ 11502971 (+)
ENSDARG00000053617	camk2a	21: 43897128 ~ 43952958 (-)
ENSDARG00000077710	nlgn1	11: 9564154 ~ 9985415 (-)
ENSDARG00000037415	dlgap1b	24: 9162512 ~ 9268048 (+)
ENSDARG00000062325	shank2b	25: 14165447 ~ 14366077 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000041926

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences