|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
PRJNA551501 (2mpf) |
thyroid gland |
baseline |
2mpf, Tg(tg:mVenus-T2A-NTR) |
Endothelium (cluster: 8)
|
potential marker
|
NA
|
|
PRJNA415636 (brain) |
brain |
baseline |
adult, Zebrabow M, brain |
|
|
|
|
GSE144944 (fgfr3 +|+) |
cranial vault |
baseline |
1mpf, fgfr3 +/+ |
|
|
|
|
GSE144944 (fgfr3 -|-) |
cranial vault |
growth |
1mpf, fgfr3 -/- |
|
|
|
|
GSE173972 (KO, ezh1-|-) |
embryo |
hematopoietic |
1.25dpf, Kdrl-positive embryos |
|
|
|
|
PRJNA706197 (18hpf) |
embryo |
baseline |
18hpf, FACS sorted sox10:nEOS cells |
|
|
|
|
PRJNA564810 (1dpf) |
embryo |
baseline |
1dpf, a single-cell transcriptome atlas for zebrafish development |
|
|
|
|
GSE173972 (WT, ezh1+|+) |
embryo |
baseline |
1.25dpf, Kdrl-positive embryos |
|
|
|
|
GSE168695 (5dpf) |
embryo |
baseline |
5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos |
|
|
|
|
PRJNA564810 (5dpf) |
embryo |
baseline |
5dpf, a single-cell transcriptome atlas for zebrafish development |
|
|
|
|
GSE173972 (HET, ezh1+|-) |
embryo |
hematopoietic |
1.25dpf, Kdrl-positive embryos |
|
|
|
|
PRJNA564810 (2dpf) |
embryo |
baseline |
2dpf, a single-cell transcriptome atlas for zebrafish development |
|
|
|
|
GSE161712 (M. marinum) |
granulomas |
disease |
adult, infected with bacteria of M. marinum |
|
|
|
|
PRJNA608912 (kit_14dpi) |
heart |
regeneration |
5mpf, kit mutant, 14 days post injury |
|
|
|
|
PRJNA608912 (kit_uninjuried) |
heart |
regeneration |
5mpf, kit mutant, uninjured |
|
|
|
|
PRJNA608912 (wt_2dpi) |
heart |
regeneration |
5mpf, wild type, 2 days post injury |
|
|
|
|
PRJNA608912 (kit_2dpi) |
heart |
regeneration |
5mpf, kit mutant, 2 days post injury |
|
|
|
|
PRJNA608912 (wt_7dpi) |
heart |
regeneration |
5mpf, wild type, 7 days post injury |
|
|
|
|
PRJNA608912 (kit_7dpi) |
heart |
regeneration |
5mpf, kit mutant, 7 days post injury |
|
|
|
|
PRJNA608912 (wt_14dpi) |
heart |
regeneration |
5mpf, wild type, 14 days post injury |
|
|
|
|
PRJNA608912 (wt_unjuried) |
heart |
baseline |
5mpf, wild type, uninjured |
|
|
|
|
PRJNA415636 (heart, blood) |
heart, blood |
baseline |
adult, Zebrabow M, heart and blood |
|
|
|
|
PRJNA415636 (pancreas, liver) |
hepatopancreas |
baseline |
adult, Zebrabow M, pancreas and liver |
|
|
|
|
PRJNA754013 (zebrafish) |
hypothalamus |
baseline |
adult, male, female, untreatment |
|
|
|
|
GSE137784 (no HCC) |
liver |
baseline |
6mpf, male, isolated from the CreLox zebrafish with HCC |
|
|
|
|
GSE137784 (HCC, HepABC) |
liver |
disease |
6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC |
|
|
|
|
GSE137784 (HCC, CreLox) |
liver |
disease |
6mpf, male, isolated from the zebrafish without HCC |
|
|
|
|
GSE148591 (6mpf) |
pituitary |
baseline |
6mpf, male, Sox17:CreERT2 |
|
|
|
|
GSE148591 (3mpf) |
pituitary |
transplant |
3mpf, graft transplantation during early embryogenesis |
|
|
|
|
PRJNA415636 (primary pancreatic islet) |
primary pancreatic islet |
baseline |
adult, Zebrabow M, primary pancreatic islet |
|
|
|
|
PRJNA551501 (8mpf) |
thyroid gland |
baseline |
8mpf, Tg(tg:mVenus-T2A-NTR) |
|
|
|
|
GSE163907 (24hpf) |
trunk |
baseline |
24hpf, trunk tg(sox10:GFP) positive cells |
|
|
|
|
GSE152982 (wild type) |
trunk |
baseline |
1.25dpf, untreatment |
|
|
|
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
|
|
|
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
|
|
|
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
6dpf, cd41:GFPlow-runx1-/- |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
|
|
|
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
10dpf, cd41:GFPlow-runx1-/- |
|
|
|
: marker.