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| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| btbd17b | 3: 12884117 ~ 12890779 (-) | protein_coding | GRCz11 | Danio rerio |
: marker.| Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
|---|---|---|---|---|---|---|---|
| GSE175929 (5mpf) | retina | baseline | 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg |
Bipolar cells (cluster: 13) |
potential marker |
NA |
|
| GSE122680 (3dpf) | retina | baseline | 3dpf, WT, untreatment |
Horizontal cells (cluster: 10) Horizontal cells (cluster: 13) |
potential marker potential marker |
NA NA |
|
| GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment |
Horizontal cells (cluster: 12) Horizontal cells (cluster: 12) |
potential marker potential marker |
NA NA |
|
| PRJNA672101 (nrl-KO) | retina | growth | 5mpf, three retinas from nrl-KO zebrafsih |
Horizontal cells (cluster: 11) |
potential marker |
NA |
|
| PRJNA415636 (brain) | brain | baseline | adult, Zebrabow M, brain | ||||
| GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment | ||||
| GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment | ||||
| GSE158142 (15dpf) | brain, eye | baseline | 15dpf, untreatment | ||||
| GSE151354 (wild type) | cartilage | baseline | 21dpf, wild type | ||||
| GSE151354 (nkx3.2 mutant) | cartilage | growth | 21dpf, nkx3.2 mutant | ||||
| GSE130526 (fin) | dorsal and anal fin | baseline | adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry | ||||
| PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development | ||||
| GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | ||||
| GSE106587 (WT) | embryo | baseline | 12hpf, 6 somites, wild-type TLAB embryo | ||||
| PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development | ||||
| PRJNA706197 (14hpf) | embryo | baseline | 14hpf, FACS sorted sox10:nEOS cells | ||||
| GSE106587 (MZoep mutant) | embryo | baseline | 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo | ||||
| GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells | ||||
| GSE161712 (M. marinum) | granulomas | disease | adult, infected with bacteria of M. marinum | ||||
| GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment | ||||
| GSE158142 (18hpf) | head | baseline | 18hpf, 18 somites, untreatment | ||||
| GSE158142 (12hpf) | head | baseline | 12hpf, 6 somites, untreatment | ||||
| GSE158142 (2dpf) | head | baseline | 2dpf, untreatment | ||||
| GSE158142 (20hpf) | head | baseline | 20hpf, 21-22 somites, untreatment | ||||
| GSE158142 (14hpf) | head | baseline | 14hpf, 10 somites, untreatment | ||||
| GSE158142 (3dpf) | head | baseline | 3dpf, untreatment | ||||
| GSE158142 (24hpf) | head | baseline | 24hpf, untreatment | ||||
| GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment | ||||
| GSE150498 (wildtype, 2X DSS+BZA) | intestine | disease | 6dpf, wildtype, 2X DSS+BZA | ||||
| GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | ||||
| GSE150498 (wildtype, untreated) | intestine | baseline | 6dpf, wildtype, untreated | ||||
| GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | ||||
| GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | ||||
| PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days | ||||
| PRJNA672101 (WT) | retina | baseline | 5mpf, three retinas from WT zebrafsih | ||||
| GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment | ||||
| GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment | ||||
| GSE122680 (1.5dpf) | retina | baseline | 1.5dpf, WT, untreatment | ||||
| PRJNA551501 (2mpf) | thyroid gland | baseline | 2mpf, Tg(tg:mVenus-T2A-NTR) | ||||
| GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | ||||
| GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | ||||
| GSE159709 (melanoma) | tumor | disease | adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | ||||
| GSE158099 (WT) | whole body | baseline | 2.5dpf, cd41:GFPlow-WT | ||||
| GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 2.5dpf, cd41:GFPlow-runx1-/- | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- |