GENE ID: ENSDARG00000040321

Symbol Location Gene type Genome version Species
rx2 2: 55833425 ~ 55861351 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000040321 (rx2), yellow represents other genes.
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  • The more connections, the bigger symbol size.


    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Optic cup (cluster: 5)
    		 marker
    		 DOI:10.1126/science.aar3131
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Optic vesicle (cluster: 3)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Optic vesicle (cluster: 4)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Optic vesicle (cluster: 4)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Optic vesicle (cluster: 7)
    		 marker
    		 DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Retina (cluster: 10)
    		 potential marker
    		 NA
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Red cones (cluster: 7)
    		 potential marker
    		 NA
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Retinal progenitors (cluster: 4)
    Retinal progenitors (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
    GSE158142 (24hpf) head baseline 24hpf, untreatment
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
    GSE158142 (2dpf) head baseline 2dpf, untreatment
    GSE158142 (3dpf) head baseline 3dpf, untreatment
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-

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