Fish Single-cell RNA Database

GENE ID: ENSDARG00000110341

Symbol	Location	Gene type	Genome version	Species
hsd11b1lb	2: 53459873 ~ 53481912 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000110341 (hsd11b1lb), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000032862	ugt5g1	7: 22688781 ~ 22696987 (+)
ENSDARG00000001975	hsd11b2	7: 35112052 ~ 35126374 (-)
ENSDARG00000039501	ugt2a6	5: 69856153 ~ 69865574 (+)
ENSDARG00000011537	ugt2a5	5: 69868911 ~ 69876834 (+)
ENSDARG00000051940	ugt2a4	5: 69926766 ~ 69948119 (-)
ENSDARG00000110614	ugt2a7	5: 9405283 ~ 9406062 (+)
ENSDARG00000110341	hsd11b1lb	2: 53459873 ~ 53481912 (-)
ENSDARG00000024828	tmem134	1: 39878634 ~ 39895918 (-)
ENSDARG00000069926	hsd3b1	9: 21194445 ~ 21200464 (+)
ENSDARG00000006220	ugt1a1	9: 9969987 ~ 10003782 (-)
ENSDARG00000037550	cyp21a2	16: 16605517 ~ 16619897 (-)
ENSDARG00000042014	cyp11c1	16: 54459135 ~ 54471235 (-)
ENSDARG00000019747	hsd3b2	20: 1272526 ~ 1276175 (+)
ENSDARG00000006372	ugt5c2	18: 40462445 ~ 40469527 (+)
ENSDARG00000098315	cyp1a	18: 5588068 ~ 5598958 (-)
ENSDARG00000054835	ugt5f1	18: 1249617 ~ 1270220 (-)
ENSDARG00000089507	ugt1b5	11: 30303785 ~ 30330015 (+)
ENSDARG00000097024	ugt1b4	11: 30306606 ~ 30329055 (+)
ENSDARG00000097231	ugt1b2	11: 30314885 ~ 30329055 (+)
ENSDARG00000097979	ugt1b3	11: 30310170 ~ 30329055 (+)
ENSDARG00000002394	ugt5d1	10: 25726694 ~ 25728744 (+)
ENSDARG00000043901	ugt5g2	10: 22082596 ~ 22086626 (-)
ENSDARG00000071377	hsd11b1la	22: 19552987 ~ 19562455 (+)
ENSDARG00000016479	ugt5a1	25: 29407671 ~ 29415382 (-)
ENSDARG00000093640	ugt5a2	25: 29401246 ~ 29415369 (-)
--	ugt2b5	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	Hepatocytes (cluster: 9)	potential marker	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000110341

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences