Fish Single-cell RNA Database

GENE ID: ENSDARG00000030350

Symbol	Location	Gene type	Genome version	Species
mnx2b	1: 5449777 ~ 5455502 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000030350 (mnx2b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000041150	slc17a6b	7: 32811907 ~ 32833255 (-)
ENSDARG00000067964	slc6a5	7: 17229282 ~ 17252274 (+)
ENSDARG00000060127	adamts3	5: 45322734 ~ 45532848 (+)
ENSDARG00000002760	gdf5	6: 52637308 ~ 52661824 (-)
ENSDARG00000005343	ccdc85al	6: 6736925 ~ 6775821 (-)
ENSDARG00000018534	slc6a9	2: 33335911 ~ 33422798 (+)
ENSDARG00000053248	inab	1: 31864404 ~ 31867717 (+)
ENSDARG00000030350	mnx2b	1: 5449777 ~ 5455502 (-)
ENSDARG00000039458	lhx4	8: 14453933 ~ 14484599 (-)
ENSDARG00000056594	irx1b	19: 28127654 ~ 28130658 (-)
ENSDARG00000075930	adamts2	21: 32508908 ~ 32684570 (-)
ENSDARG00000061099	nfasca	11: 23704410 ~ 23884805 (+)
ENSDARG00000077318	CR376737.1	24: 17136749 ~ 17139114 (-)
ENSDARG00000001127	slc17a6a	25: 35250976 ~ 35271284 (+)
ENSDARG00000003971	isl2a	25: 32746014 ~ 32751982 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000030350

EXPRESSION

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