Fish Single-cell RNA Database

GENE ID: ENSDARG00000022668

Symbol	Location	Gene type	Genome version	Species
grapb	1: 8165340 ~ 8192418 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000022668 (grapb), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000036420	si:dkey-33c9.6	7: 20383841 ~ 20436781 (+)
ENSDARG00000060330	si:ch211-284e13.4	5: 38088594 ~ 38094130 (-)
ENSDARG00000095180	abr	5: 62611400 ~ 62642718 (+)
ENSDARG00000059587	NA	5: 62374092 ~ 62545913 (+)
ENSDARG00000078688	frs3	6: 40587551 ~ 40606273 (+)
ENSDARG00000060235	mst1ra	6: 42475730 ~ 42505007 (+)
ENSDARG00000022668	grapb	1: 8165340 ~ 8192418 (-)
ENSDARG00000078308	spry2	1: 5273481 ~ 5277583 (+)
ENSDARG00000076546	trhra	16: 38818864 ~ 38826777 (+)
ENSDARG00000089043	ptpn6	16: 31720042 ~ 31756963 (-)
ENSDARG00000041947	styk1b	16: 31965340 ~ 31976269 (-)
ENSDARG00000070124	ptpn23a	16: 41112346 ~ 41131578 (-)
ENSDARG00000078217	cblc	16: 25761101 ~ 25800819 (+)
ENSDARG00000026519	ralgps2	20: 15933028 ~ 16156419 (-)
ENSDARG00000090607	si:dkeyp-117b11.1	8: 2116429 ~ 2153147 (-)
ENSDARG00000044900	prlhr2a	8: 37905666 ~ 37950194 (+)
ENSDARG00000036215	lcp2b	14: 34501245 ~ 34510631 (+)
ENSDARG00000091321	CABZ01088229.1	14: 146857 ~ 152309 (+)
ENSDARG00000042722	blnk	13: 50518815 ~ 50567658 (-)
ENSDARG00000092862	si:ch211-260p9.3	18: 13300768 ~ 13321062 (+)
ENSDARG00000087941	pde8a	18: 14710 ~ 33344 (-)
ENSDARG00000113723	baiap2b	12: 35650321 ~ 35653051 (+)
ENSDARG00000105120	gab2	15: 9444982 ~ 9593532 (-)
ENSDARG00000086159	si:ch73-206d17.1	23: 26491931 ~ 26502521 (+)
ENSDARG00000042940	nab1a	22: 12870275 ~ 12890921 (-)
ENSDARG00000062080	shc2	22: 21317597 ~ 21351469 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000022668

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences