Fish Single-cell RNA Database

GENE ID: ENSDARG00000055415

Symbol	Location	Gene type	Genome version	Species
zp2l1	9: 35631440 ~ 35633827 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000055415 (zp2l1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000057328	cth1	7: 17947217 ~ 17950315 (+)
ENSDARG00000035171	btg4	5: 57924611 ~ 57926693 (+)
ENSDARG00000102892	h1m	5: 68326858 ~ 68333081 (-)
ENSDARG00000116005	zgc:171446	3: 3402223 ~ 3413680 (-)
ENSDARG00000016908	zp3e	3: 31875772 ~ 31879201 (-)
ENSDARG00000075737	zgc:165518	3: 66842 ~ 79366 (-)
ENSDARG00000074764	zgc:171426	3: 3469600 ~ 3481763 (+)
ENSDARG00000104961	ghrhra	2: 50906097 ~ 50966124 (-)
ENSDARG00000042063	si:ch211-145c1.1	9: 8288268 ~ 8314028 (-)
ENSDARG00000086529	si:dkey-90l23.2	9: 8364553 ~ 8369028 (+)
ENSDARG00000034989	retsatl	9: 44994214 ~ 44998722 (+)
ENSDARG00000055415	zp2l1	9: 35631440 ~ 35633827 (-)
ENSDARG00000105043	si:dkey-152b24.6	16: 46576702 ~ 46579981 (-)
ENSDARG00000069401	si:dkeyp-114g9.1	20: 41967312 ~ 41992878 (-)
ENSDARG00000042129	zp3a.1	20: 33991801 ~ 33993698 (+)
ENSDARG00000042130	zp3a.2	20: 33987465 ~ 33989427 (+)
ENSDARG00000069251	zpax1	20: 43737022 ~ 43743700 (-)
ENSDARG00000019706	zar1	20: 23423814 ~ 23426339 (-)
ENSDARG00000090768	zp3.2	17: 2569521 ~ 2596125 (-)
ENSDARG00000115457	zp3.2	17: 2587132 ~ 2590222 (-)
ENSDARG00000099060	zgc:111868	12: 42364157 ~ 42368296 (-)
ENSDARG00000008541	chia.4	23: 17926279 ~ 17933143 (+)
ENSDARG00000006580	cldnd	21: 25777425 ~ 25778201 (+)
ENSDARG00000094392	si:dkey-229d11.5	21: 43644573 ~ 43666481 (-)
ENSDARG00000070709	wu:fi42e03	11: 29537756 ~ 29540033 (+)
ENSDARG00000027639	zgc:165539	10: 21541925 ~ 21545117 (-)
ENSDARG00000076949	zgc:173837	10: 19595009 ~ 19598009 (+)
ENSDARG00000087961	avd	10: 21359062 ~ 21362320 (-)
ENSDARG00000092924	zgc:171474	24: 10010630 ~ 10014624 (-)
ENSDARG00000086221	si:ch211-226h8.4	22: 25184459 ~ 25185570 (+)
ENSDARG00000016825	vtg6	22: 24811396 ~ 24818066 (-)
ENSDARG00000088923	si:ch211-12h2.8	22: 25611415 ~ 25612680 (-)
ENSDARG00000116290	si:ch211-250e5.16	22: 25753972 ~ 25756668 (+)
ENSDARG00000051959	mmp15a	25: 17581393 ~ 17587860 (-)
--	ddx41	--
--	wu:fi34b01	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA706197 (12hpf)	embryo	baseline	12hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000055415

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences