Fish Single-cell RNA Database

GENE ID: ENSDARG00000073742

Symbol	Location	Gene type	Genome version	Species
prss59.2	16: 26017360 ~ 26018694 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000073742 (prss59.2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000039730	zgc:112160	7: 35062132 ~ 35066457 (-)
ENSDARG00000093844	zgc:136461	7: 35068036 ~ 35069807 (+)
ENSDARG00000062376	nlgn3b	5: 23283890 ~ 23317477 (-)
ENSDARG00000091996	tcnbb	5: 30614532 ~ 30615901 (-)
ENSDARG00000060012	f2r	5: 46196147 ~ 46198034 (+)
ENSDARG00000090524	f2rl2	5: 46146084 ~ 46152740 (-)
ENSDARG00000076043	si:dkeyp-73d8.9	2: 32642338 ~ 32643738 (-)
ENSDARG00000069381	si:ch211-125e6.5	9: 33061564 ~ 33063083 (-)
ENSDARG00000038321	zgc:172053	9: 33080438 ~ 33081978 (-)
ENSDARG00000025783	si:ch211-125e6.11	9: 33207574 ~ 33209659 (+)
ENSDARG00000073742	prss59.2	16: 26017360 ~ 26018694 (+)
ENSDARG00000104786	nlgn3a	14: 14224730 ~ 14534457 (+)
ENSDARG00000021250	slc25a48	14: 25590603 ~ 25599002 (-)
ENSDARG00000079399	NA	14: 36869273 ~ 36878988 (+)
ENSDARG00000089887	mmp20a	15: 25545976 ~ 25556227 (-)
ENSDARG00000029822	cel.2	21: 11385031 ~ 11393979 (+)
ENSDARG00000086262	NA	21: 7947630 ~ 7953792 (-)
ENSDARG00000068856	f2rl1.1	21: 7934573 ~ 7940105 (-)
ENSDARG00000077638	NA	21: 7972805 ~ 7995994 (-)
ENSDARG00000086236	NA	21: 7998530 ~ 8003782 (-)
ENSDARG00000090041	NA	21: 8006536 ~ 8026267 (-)
ENSDARG00000087469	NA	21: 8046804 ~ 8054977 (-)
ENSDARG00000059507	NA	21: 8076666 ~ 8085635 (-)
ENSDARG00000079472	NA	21: 5846969 ~ 5856050 (-)
ENSDARG00000046053	slc27a6	10: 16501699 ~ 16540603 (+)
ENSDARG00000095462	cela1.2	22: 7472420 ~ 7476352 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	Pancreas exocrine cells (cluster: 4)	marker	DOI:10.1038/nbt.4124
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	Bi-hormonal endocrine cells (cluster: 2)	potential marker	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	Pancreatic cells (cluster: 6)	potential marker	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	Pancreatic cells (cluster: 9)	potential marker	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	Pancreatic cells (cluster: 8)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 siblings)	neuromast	regeneration	5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000073742

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences