Fish Single-cell RNA Database

GENE ID: ENSDARG00000017532

Symbol	Location	Gene type	Genome version	Species
kif25	20: 30902138 ~ 30920356 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000017532 (kif25), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000008022	kif18a	7: 31976764 ~ 32021853 (-)
ENSDARG00000015610	tubg1	3: 37059803 ~ 37082618 (-)
ENSDARG00000038770	zgc:103625	3: 50069204 ~ 50075190 (+)
ENSDARG00000052016	cabp2a	1: 44127292 ~ 44141442 (+)
ENSDARG00000008639	kifap3a	20: 34420623 ~ 34453623 (-)
ENSDARG00000017532	kif25	20: 30902138 ~ 30920356 (-)
ENSDARG00000021345	prph2lb	20: 27384138 ~ 27390258 (-)
ENSDARG00000074071	mrnip	14: 16765791 ~ 16775249 (-)
ENSDARG00000078741	NA	13: 39236141 ~ 39271505 (+)
ENSDARG00000102624	kif22	12: 5048044 ~ 5071836 (+)
ENSDARG00000022918	tbcc	12: 34891529 ~ 34892823 (+)
ENSDARG00000053026	kif19	12: 38770654 ~ 38805710 (+)
ENSDARG00000029043	nup42	19: 619200 ~ 627153 (+)
ENSDARG00000058219	tubd1	15: 17397321 ~ 17406056 (-)
ENSDARG00000015460	racgap1	23: 33757173 ~ 33775309 (-)
ENSDARG00000005098	zgc:86764	21: 20309085 ~ 20322816 (-)
ENSDARG00000058357	ankrd33ba	24: 22039964 ~ 22059801 (+)
ENSDARG00000100918	prc1a	25: 7435291 ~ 7461466 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (2dpf)	head	baseline	2dpf, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000017532

EXPRESSION

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