Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
si:ch211-57i17.5 | 20: 46765733 ~ 46773258 (-) | protein_coding | GRCz11 | Danio rerio |
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos | NA | NA | NA | |
GSE158142 (3dpf) | head | baseline | 3dpf, untreatment |
Otic vesicle (cluster: 17) |
potential marker |
NA |
|
GSE123241 (wild type) | neuromast | baseline | 5dpf, wild type during sensory hair cell regeneration, lateral line sensory |
Hair cells (cluster: 7) |
potential marker |
NA |
|
GSE123241 (fgf3 mutants) | neuromast | regeneration | 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory |
Hair cells (cluster: 6) |
potential marker |
NA |
|
GSE123241 (fgf3 siblings) | neuromast | regeneration | 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory |
Hair cells (cluster: 6) |
potential marker |
NA |
|
PRJNA605021 (hair cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae |
Hair cells (cluster: 1) |
potential marker |
NA |
|
GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis |
Gonadotrope (cluster: 3) Gonadotrope (cluster: 6) |
potential marker potential marker |
NA NA |
|
PRJNA554650 (6.5dpf) | brain | baseline | 6.5dpf, whole brain of nr1d1:VNP fish | NA | NA | NA | |
PRJNA415636 (brain) | brain | baseline | adult, Zebrabow M, brain | NA | NA | NA | |
GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment | NA | NA | NA | |
GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment | NA | NA | NA | |
GSE158142 (15dpf) | brain, eye | baseline | 15dpf, untreatment | NA | NA | NA | |
GSE144944 (fgfr3 +|+) | cranial vault | baseline | 1mpf, fgfr3 +/+ | NA | NA | NA | |
GSE144944 (fgfr3 -|-) | cranial vault | growth | 1mpf, fgfr3 -/- | NA | NA | NA | |
PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment | NA | NA | NA | |
GSE158142 (2dpf) | head | baseline | 2dpf, untreatment | NA | NA | NA | |
PRJNA754013 (zebrafish) | hypothalamus | baseline | adult, male, female, untreatment | NA | NA | NA | |
PRJNA605021 (supporting cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae | NA | NA | NA | |
PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days | NA | NA | NA | |
PRJNA668529 (3h) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 hours | NA | NA | NA | |
PRJNA668529 (control) | olfactory rosette | baseline | 3mpf, intranasal PBS | NA | NA | NA | |
GSE148591 (6mpf) | pituitary | baseline | 6mpf, male, Sox17:CreERT2 | NA | NA | NA | |
GSE175929 (5mpf) | retina | baseline | 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg | NA | NA | NA | |
GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | NA | NA | NA | |
GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | NA | NA | NA | |
GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | NA | NA | NA | |
GSE158099 (WT) | whole body | baseline | 2.5dpf, cd41:GFPlow-WT | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 2.5dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | NA | NA | NA |