Fish Single-cell RNA Database

GENE ID: ENSDARG00000023526

Symbol	Location	Gene type	Genome version	Species
ggt1a	8: 40042632 ~ 40075983 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000023526 (ggt1a), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000022165	mgst1.2	4: 12718965 ~ 12725513 (-)
ENSDARG00000079216	dpep2	7: 35268054 ~ 35282097 (+)
ENSDARG00000089706	si:ch211-276a23.5	7: 15341333 ~ 15370042 (-)
ENSDARG00000036809	NA	7: 15373412 ~ 15413188 (-)
ENSDARG00000095464	gstt2	5: 10046643 ~ 10056341 (+)
ENSDARG00000038980	txndc12	2: 9592319 ~ 9607879 (-)
ENSDARG00000061981	lap3	1: 19418380 ~ 19431510 (-)
ENSDARG00000056510	gstk1	16: 32009203 ~ 32013929 (-)
ENSDARG00000092052	gstk4	16: 31982149 ~ 32008281 (-)
ENSDARG00000005085	ggctb	16: 53685812 ~ 53709101 (+)
ENSDARG00000070426	chac1	20: 28266892 ~ 28269462 (+)
ENSDARG00000043511	prdx6	20: 15164482 ~ 15184869 (+)
ENSDARG00000042533	gstm.1	8: 25295160 ~ 25297928 (+)
ENSDARG00000018953	gclm	8: 15269423 ~ 15277252 (+)
ENSDARG00000023526	ggt1a	8: 40042632 ~ 40075983 (-)
ENSDARG00000079932	zgc:152830	8: 41229233 ~ 41256529 (+)
ENSDARG00000071345	mgst2	14: 46216703 ~ 46220099 (+)
ENSDARG00000062598	ltc4s	14: 16370063 ~ 16379843 (-)
ENSDARG00000033364	mgst3b	13: 45476181 ~ 45482003 (+)
ENSDARG00000022183	gsto1	13: 25380432 ~ 25389051 (+)
ENSDARG00000013095	gclc	13: 2357637 ~ 2392664 (+)
ENSDARG00000045123	oplah	12: 13652361 ~ 13721912 (+)
ENSDARG00000026348	csad	23: 36424768 ~ 36441693 (-)
ENSDARG00000037706	gss	23: 14743087 ~ 14769523 (-)
ENSDARG00000103878	anpepb	25: 10811551 ~ 10827771 (+)
ENSDARG00000097285	NA	25: 10830269 ~ 10841591 (+)
--	mgst3	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	Epithelialized macrophages (cluster: 12) Epithelialized macrophages (cluster: 3)	potential marker potential marker	NA NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000023526

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences