GENE ID: ENSDARG00000075183

Symbol Location Gene type Genome version Species
rnf220b 8: 18242505 ~ 18316482 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000075183 (rnf220b), yellow represents other genes.
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    • EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells NA NA NA
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells NA NA NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells NA NA NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain NA NA NA
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish NA NA NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment NA NA NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment NA NA NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment NA NA NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. NA NA NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ NA NA NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry NA NA NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells NA NA NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo NA NA NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NA NA NA
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells NA NA NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells NA NA NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells NA NA NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum NA NA NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment NA NA NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment NA NA NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment NA NA NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment NA NA NA
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory NA NA NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 NA NA NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis NA NA NA
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg NA NA NA
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment NA NA NA
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih NA NA NA
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment NA NA NA
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih NA NA NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) NA NA NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) NA NA NA
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment NA NA NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone NA NA NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT NA NA NA
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- NA NA NA

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