Fish Single-cell RNA Database

GENE ID: ENSDARG00000090489

Symbol	Location	Gene type	Genome version	Species
NA	17: 6553795 ~ 6600914 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000090489 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000028192	cradd	4: 18383253 ~ 18416566 (-)
ENSDARG00000098345	mamdc2a	5: 52509108 ~ 52569014 (-)
ENSDARG00000058508	cfap70	3: 11977271 ~ 12026741 (-)
ENSDARG00000103545	tctex1d1	2: 14207559 ~ 14272083 (-)
ENSDARG00000094272	map3k19	9: 23224761 ~ 23234064 (+)
ENSDARG00000003584	pla2g7	20: 35461736 ~ 35471079 (-)
ENSDARG00000070052	tdrd6	20: 35438300 ~ 35462226 (+)
ENSDARG00000038866	trappc8	20: 6308564 ~ 6476705 (-)
ENSDARG00000090489	NA	17: 6553795 ~ 6600914 (-)
ENSDARG00000089954	si:ch211-189e2.3	17: 6603691 ~ 6641548 (-)
ENSDARG00000020901	gabrp	14: 34547554 ~ 34557058 (+)
ENSDARG00000074179	calhm2.2	13: 25418561 ~ 25424269 (+)
ENSDARG00000059891	AL929217.1	13: 51140464 ~ 51247529 (-)
ENSDARG00000094512	gabrz	12: 29054907 ~ 29105525 (+)
ENSDARG00000036412	si:ch211-81a5.5	19: 9091673 ~ 9107063 (+)
ENSDARG00000073695	mamdc2b	10: 15648857 ~ 15672862 (-)
ENSDARG00000088232	shisa2b	24: 21346796 ~ 21361501 (+)
ENSDARG00000067711	parvg	25: 5068442 ~ 5084539 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000090489

EXPRESSION

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