Fish Single-cell RNA Database

GENE ID: ENSDARG00000017565

Symbol	Location	Gene type	Genome version	Species
itk	14: 34045284 ~ 34074510 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000017565 (itk), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000100389	nitr11a	7: 17295053 ~ 17297156 (-)
ENSDARG00000075720	il2rb	3: 25191366 ~ 25209006 (+)
ENSDARG00000006468	grap2a	3: 29445473 ~ 29468859 (+)
ENSDARG00000096280	ighz	3: 33994684 ~ 33997763 (-)
ENSDARG00000078975	igl1c3	3: 58833306 ~ 58835177 (+)
ENSDARG00000093689	FP016018.1	3: 58656312 ~ 58656994 (+)
ENSDARG00000087496	tradv30.0.6	2: 36597322 ~ 36597793 (-)
ENSDARG00000095102	si:ch211-132g1.4	1: 1904419 ~ 1911381 (+)
ENSDARG00000093102	si:ch211-132g1.6	1: 1896737 ~ 1899848 (+)
ENSDARG00000095070	cd28	9: 13985567 ~ 13989879 (+)
ENSDARG00000089043	ptpn6	16: 31720042 ~ 31756963 (-)
ENSDARG00000070668	cd4-1	16: 11911897 ~ 11946139 (-)
ENSDARG00000007783	blk	20: 19175031 ~ 19198334 (+)
ENSDARG00000015752	zap70	8: 20393250 ~ 20414364 (+)
ENSDARG00000079826	gpr174	14: 10567104 ~ 10601294 (+)
ENSDARG00000017565	itk	14: 34045284 ~ 34074510 (-)
ENSDARG00000070475	khdrbs1b	19: 30348676 ~ 30359059 (-)
ENSDARG00000038442	plcg1	23: 2789422 ~ 2872819 (+)
ENSDARG00000104197	ptpn22	23: 26142613 ~ 26180539 (+)
ENSDARG00000078970	il7r	21: 22429509 ~ 22435957 (-)
ENSDARG00000055955	lcp2a	21: 30306369 ~ 30347592 (+)
ENSDARG00000008186	syk	10: 5533843 ~ 5581487 (-)
ENSDARG00000089327	BX120005.2	10: 29840725 ~ 29848513 (+)
ENSDARG00000111761	igl3v4	24: 38197852 ~ 38198344 (+)
ENSDARG00000093855	igl3v2	24: 38201089 ~ 38201564 (+)
ENSDARG00000110046	igl3v1	24: 38205798 ~ 38206291 (+)
ENSDARG00000097228	si:dkey-234i14.12	25: 37290206 ~ 37290726 (+)
ENSDARG00000074062	si:dkey-234i14.15	25: 37305086 ~ 37305738 (-)
ENSDARG00000079843	igl4v8	25: 37289088 ~ 37317174 (+)
ENSDARG00000077452	si:dkey-234i14.14	25: 37299390 ~ 37300132 (+)
ENSDARG00000019591	igl4v9	25: 37318550 ~ 37319117 (-)
ENSDARG00000051760	igl4v10	25: 37320928 ~ 37322081 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	Immune cells (cluster: 4)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000017565

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences