Fish Single-cell RNA Database

GENE ID: ENSDARG00000069117

Symbol	Location	Gene type	Genome version	Species
kcnh5b	13: 37302575 ~ 37383625 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000069117 (kcnh5b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000074320	NA	5: 68112194 ~ 68190264 (+)
ENSDARG00000037919	rbbp6	3: 35406395 ~ 35421194 (+)
ENSDARG00000040741	kcnab1b	2: 44426609 ~ 44510752 (+)
ENSDARG00000012269	clcn1b	16: 17477152 ~ 17541890 (-)
ENSDARG00000110581	mapk4	8: 29742237 ~ 29769157 (+)
ENSDARG00000102546	cdk11b	8: 53948194 ~ 53960349 (-)
ENSDARG00000075421	pttg1	14: 34558480 ~ 34561282 (+)
ENSDARG00000069117	kcnh5b	13: 37302575 ~ 37383625 (-)
ENSDARG00000008140	kcnab1a	18: 34362608 ~ 34536067 (+)
ENSDARG00000062084	clcn1a	19: 9612163 ~ 9662958 (-)
ENSDARG00000009273	ppm1da	15: 26933196 ~ 26939404 (+)
ENSDARG00000062699	nkain4	23: 14265122 ~ 14403939 (-)
ENSDARG00000062134	kcnab2b	23: 21067389 ~ 21114732 (+)
ENSDARG00000055295	cyb561d1	11: 36408636 ~ 36415700 (+)
ENSDARG00000038559	h1-0	24: 37567029 ~ 37568359 (-)
ENSDARG00000097155	NA	25: 8623709 ~ 8625601 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment	NA	NA	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	NA	NA	NA
GSE158142 (24hpf)	head	baseline	24hpf, untreatment	NA	NA	NA
GSE158142 (2dpf)	head	baseline	2dpf, untreatment	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	NA	NA	NA
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000069117

EXPRESSION

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