Fish Single-cell RNA Database

GENE ID: ENSDARG00000099363

Symbol	Location	Gene type	Genome version	Species
lhb	13: 2523032 ~ 2526033 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000099363 (lhb), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000012435	spic	4: 17807837 ~ 17812131 (-)
ENSDARG00000077985	kiss2	4: 16827390 ~ 16828499 (+)
ENSDARG00000003553	gnrhr2	7: 52364748 ~ 52369218 (+)
ENSDARG00000068731	rxfp2l	5: 35875085 ~ 35953472 (-)
ENSDARG00000062631	npffr1l2	5: 14165567 ~ 14239078 (-)
ENSDARG00000035609	mtnr1c	5: 22633188 ~ 22665855 (+)
ENSDARG00000067563	kiss1rb	5: 69541667 ~ 69548986 (-)
ENSDARG00000002728	kiss1ra	2: 33796207 ~ 33821163 (+)
ENSDARG00000024759	inhbab	2: 21485492 ~ 21504467 (+)
ENSDARG00000040700	nab1b	9: 41367848 ~ 41401564 (-)
ENSDARG00000058058	igf3	8: 13978486 ~ 13985032 (-)
ENSDARG00000056214	gnrh3	17: 20204122 ~ 20207376 (+)
ENSDARG00000040479	cga	17: 49439219 ~ 49443399 (-)
ENSDARG00000026081	lhcgr	13: 47573405 ~ 47618847 (+)
ENSDARG00000099363	lhb	13: 2523032 ~ 2526033 (+)
ENSDARG00000061873	olfcv3	18: 33276609 ~ 33281267 (+)
ENSDARG00000038116	gnrhr4	18: 25391171 ~ 25402715 (-)
ENSDARG00000071494	fshr	12: 24738962 ~ 24770190 (+)
ENSDARG00000036227	npvf	19: 19976990 ~ 19980132 (+)
ENSDARG00000100593	gnrhr1	19: 43213527 ~ 43226124 (-)
ENSDARG00000034227	si:dkey-243i1.1	15: 26848909 ~ 26887028 (-)
ENSDARG00000043918	FO904943.1	23: 43995820 ~ 44007014 (+)
ENSDARG00000044754	gnrh2	21: 15824182 ~ 15828029 (+)
ENSDARG00000075829	kiss1	11: 23311452 ~ 23322182 (-)
ENSDARG00000092233	vtg1	22: 24730965 ~ 24738188 (-)
ENSDARG00000092028	si:dkey-4c23.3	22: 24888649 ~ 24900385 (-)
ENSDARG00000098360	cyp19a1b	25: 4890767 ~ 4904432 (-)
ENSDARG00000074560	NA	25: 20385583 ~ 20523927 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	Gonadotrope (cluster: 5)	marker	DOI:10.1126/science.aba4767
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	Gonadotrope (cluster: 3) Gonadotrope (cluster: 6)	marker marker	DOI:10.1126/science.aba4767 DOI:10.1126/science.aba4767
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (P_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo primary tumors
PRJNA641144 (P_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo primary tumors
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (D_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro individual culture
PRJNA641144 (D_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vitro individual culture
PRJNA641144 (C_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro co-culture
PRJNA641144 (C_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vitro co-culture

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000099363

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences