Fish Single-cell RNA Database

GENE ID: ENSDARG00000063019

Symbol	Location	Gene type	Genome version	Species
panx2	18: 14906570 ~ 14922872 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000063019 (panx2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000077162	nwd2	7: 61050329 ~ 61177064 (+)
ENSDARG00000016695	p2rx1	5: 31439390 ~ 31470426 (-)
ENSDARG00000014910	panx1b	5: 37840914 ~ 37852508 (+)
ENSDARG00000052155	lrrc8ab	5: 64840656 ~ 64850497 (+)
ENSDARG00000035595	ficd	5: 20485624 ~ 20491272 (-)
ENSDARG00000078283	si:zfos-323e3.4	6: 124172 ~ 131401 (-)
ENSDARG00000014969	ankhb	2: 31948352 ~ 32009716 (+)
ENSDARG00000073896	cx47.1	2: 3472832 ~ 3498451 (+)
ENSDARG00000015076	gja8b	1: 47446032 ~ 47448850 (+)
ENSDARG00000005314	NA	1: 49501171 ~ 49505449 (-)
ENSDARG00000042707	cx30.3	9: 21401189 ~ 21405066 (+)
ENSDARG00000069451	gja8a	9: 30430188 ~ 30432778 (-)
ENSDARG00000040065	gja5a	9: 30464641 ~ 30477311 (+)
ENSDARG00000034930	cx52.6	20: 23960525 ~ 23964383 (+)
ENSDARG00000054150	cx23	20: 37294112 ~ 37298274 (+)
ENSDARG00000041799	cx43	20: 40715163 ~ 40720530 (-)
ENSDARG00000076789	cx32.2	20: 40724207 ~ 40729364 (-)
ENSDARG00000042440	p2rx7	8: 30758169 ~ 30779101 (-)
ENSDARG00000042866	cx35.4	17: 24848976 ~ 24853918 (+)
ENSDARG00000067999	NA	17: 50973017 ~ 50976897 (+)
ENSDARG00000058064	cx31.7	14: 12316606 ~ 12334053 (+)
ENSDARG00000079602	calhm3	13: 25410594 ~ 25411902 (+)
ENSDARG00000077021	calhm1	13: 25412307 ~ 25417915 (+)
ENSDARG00000039482	calhm2.1	13: 25421531 ~ 25426955 (+)
ENSDARG00000063019	panx2	18: 14906570 ~ 14922872 (-)
ENSDARG00000076225	tha1	12: 34378733 ~ 34397139 (+)
ENSDARG00000044752	p2rx4a	21: 15723069 ~ 15732401 (+)
ENSDARG00000018066	ptchd1	24: 25347503 ~ 25364775 (-)
--	cx55.5	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment	NA	NA	NA
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type	NA	NA	NA
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	NA	NA	NA
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment	NA	NA	NA
GSE158142 (2dpf)	head	baseline	2dpf, untreatment	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	NA	NA	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000063019

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences