Fish Single-cell RNA Database

GENE ID: ENSDARG00000068231

Symbol	Location	Gene type	Genome version	Species
NA	18: 11556620 ~ 11595567 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000068231 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000101908	rab3ip	4: 72723304 ~ 72789220 (+)
ENSDARG00000098874	exoc6b	7: 25135739 ~ 25294104 (+)
ENSDARG00000035148	orai2	5: 61556172 ~ 61571447 (+)
ENSDARG00000002405	si:ch211-225b11.1	5: 20786772 ~ 20814588 (-)
ENSDARG00000007129	slc6a16a	3: 16566361 ~ 16591648 (+)
ENSDARG00000041575	trmt10c	1: 508885 ~ 513786 (-)
ENSDARG00000096654	si:dkey-119m7.8	20: 320415 ~ 322619 (+)
ENSDARG00000086345	cux2b	8: 4044578 ~ 4327473 (-)
ENSDARG00000011515	orai1a	8: 40275830 ~ 40288223 (+)
ENSDARG00000091222	si:dkey-190l8.2	17: 30591287 ~ 30605734 (+)
ENSDARG00000061480	si:ch211-132b12.1	18: 40552620 ~ 40565776 (+)
ENSDARG00000094946	si:ch211-132b12.2	18: 40572294 ~ 40583104 (+)
ENSDARG00000092930	si:ch211-132b12.4	18: 40609153 ~ 40613189 (+)
ENSDARG00000068231	NA	18: 11556620 ~ 11595567 (-)
ENSDARG00000054690	si:dkey-166k12.1	19: 42469058 ~ 42485064 (+)
ENSDARG00000002690	rabif	11: 24815667 ~ 24817637 (+)
ENSDARG00000078459	cux1a	10: 32898533 ~ 33156789 (-)
ENSDARG00000004154	orai1b	10: 41914084 ~ 41921417 (+)
ENSDARG00000102924	zgc:112334	22: 81799 ~ 89987 (+)
ENSDARG00000031438	kcnj11l	25: 7670683 ~ 7676816 (+)
ENSDARG00000007711	rab3il1	25: 3099073 ~ 3118114 (+)
--	cux2a	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured	NA	NA	NA
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury	NA	NA	NA
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury	NA	NA	NA
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury	NA	NA	NA
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	NA	NA	NA
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury	NA	NA	NA
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	NA	NA	NA
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury	NA	NA	NA
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000068231

EXPRESSION

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