|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
PRJNA415636 (brain) |
brain |
baseline |
adult, Zebrabow M, brain |
NA |
NA |
NA |
|
PRJNA610520 (3.5dpf) |
caudal hematopoietic tissue |
baseline |
3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. |
NA |
NA |
NA |
|
PRJNA656271 (24hpf) |
embryo |
baseline |
24hpf, FACS-isolated EGFP+ cells |
NA |
NA |
NA |
|
PRJNA656271 (2dpf) |
embryo |
baseline |
2dpf, FACS-isolated EGFP+ cells |
NA |
NA |
NA |
|
PRJNA564810 (1dpf) |
embryo |
baseline |
1dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
PRJNA608912 (kit_2dpi) |
heart |
regeneration |
5mpf, kit mutant, 2 days post injury |
NA |
NA |
NA |
|
PRJNA415636 (pancreas, liver) |
hepatopancreas |
baseline |
adult, Zebrabow M, pancreas and liver |
NA |
NA |
NA |
|
PRJNA754013 (zebrafish) |
hypothalamus |
baseline |
adult, male, female, untreatment |
NA |
NA |
NA |
|
GSE150498 (wildtype, untreated) |
intestine |
baseline |
6dpf, wildtype, untreated |
NA |
NA |
NA |
|
GSE150498 (wildtype, 1X DSS) |
intestine |
disease |
6dpf, wildtype, 1X DSS |
NA |
NA |
NA |
|
GSE150498 (nod2-|-, 1X DSS) |
intestine |
disease |
6dpf, nod2-/-, 1X DSS |
NA |
NA |
NA |
|
GSE137784 (HCC, HepABC) |
liver |
disease |
6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC |
NA |
NA |
NA |
|
GSE137784 (HCC, CreLox) |
liver |
disease |
6mpf, male, isolated from the zebrafish without HCC |
NA |
NA |
NA |
|
GSE137784 (no HCC) |
liver |
baseline |
6mpf, male, isolated from the CreLox zebrafish with HCC |
NA |
NA |
NA |
|
GSE148591 (6mpf) |
pituitary |
baseline |
6mpf, male, Sox17:CreERT2 |
NA |
NA |
NA |
|
GSE148591 (3mpf) |
pituitary |
transplant |
3mpf, graft transplantation during early embryogenesis |
NA |
NA |
NA |
|
PRJNA415636 (primary pancreatic islet) |
primary pancreatic islet |
baseline |
adult, Zebrabow M, primary pancreatic islet |
NA |
NA |
NA |
|
GSE175929 (5mpf) |
retina |
baseline |
5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg |
NA |
NA |
NA |
|
PRJNA672101 (nrl-KO) |
retina |
growth |
5mpf, three retinas from nrl-KO zebrafsih |
NA |
NA |
NA |
|
PRJNA672101 (WT) |
retina |
baseline |
5mpf, three retinas from WT zebrafsih |
NA |
NA |
NA |
|
GSE152982 (wild type) |
trunk |
baseline |
1.25dpf, untreatment |
NA |
NA |
NA |
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
NA |
NA |
NA |
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
NA |
NA |
NA |
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |