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| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| si:ch211-288g17.4 | 19: 9344171 ~ 9364342 (+) | protein_coding | GRCz11 | Danio rerio |
: marker.| Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
|---|---|---|---|---|---|---|---|
| PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development |
Hepatocytes (cluster: 20) |
potential marker |
NA |
|
| GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl |
Hepatocytes (cluster: 9) |
potential marker |
NA |
|
| GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated |
Hepatocytes (cluster: 9) |
potential marker |
NA |
|
| GSE137784 (HCC, HepABC) | liver | disease | 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC |
Hepatocytes (cluster: 2) |
potential marker |
NA |
|
| GSE137784 (HCC, CreLox) | liver | disease | 6mpf, male, isolated from the zebrafish without HCC |
Hepatocytes (cluster: 5) |
potential marker |
NA |
|
| GSE137784 (no HCC) | liver | baseline | 6mpf, male, isolated from the CreLox zebrafish with HCC |
Hepatocytes (cluster: 1) |
potential marker |
NA |
|
| PRJNA641144 (M_PRO) | tumor | disease | adult, ZMEL1-PRO cells in vivo metastases |
Melanoma cells (cluster: 8) |
potential marker |
NA |
|
| PRJNA640816 (2.9dpf) | embryo | baseline | 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells | ||||
| PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development | ||||
| PRJNA415636 (pancreas, liver) | hepatopancreas | baseline | adult, Zebrabow M, pancreas and liver | ||||
| GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | ||||
| GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | ||||
| GSE150498 (nod2-|-, 2X DSS) | intestine | disease | 6dpf, nod2-/-, 2X DSS | ||||
| GSE150498 (nod2-|-, 2X DSS+BZA) | intestine | disease | 6dpf, nod2-/-, 2X DSS+BZA | ||||
| GSE123241 (fgf3 mutants) | neuromast | regeneration | 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory | ||||
| GSE123241 (fgf3 siblings) | neuromast | regeneration | 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory | ||||
| PRJNA641144 (M_INV) | tumor | disease | adult, ZMEL1-INV cells in vivo metastases | ||||
| GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | ||||
| GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | ||||
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- |