Fish Single-cell RNA Database

GENE ID: ENSDARG00000042621

Symbol	Location	Gene type	Genome version	Species
cryaba	15: 18119618 ~ 18124678 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000042621 (cryaba), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000041065	hspb1	5: 3568016 ~ 3584815 (-)
ENSDARG00000041301	crybb3	5: 6489260 ~ 6508250 (-)
ENSDARG00000028082	mapkapk5	5: 69553686 ~ 69571572 (-)
ENSDARG00000021924	hsp70.3	3: 26123736 ~ 26127091 (+)
ENSDARG00000078674	hspb9	3: 33300522 ~ 33301321 (+)
ENSDARG00000030349	cryba2a	6: 13780205 ~ 13783634 (-)
ENSDARG00000075540	NA	6: 46341306 ~ 46346978 (+)
ENSDARG00000011998	bfsp2	2: 32761130 ~ 32769759 (-)
ENSDARG00000016074	cryz	2: 11100613 ~ 11120220 (-)
ENSDARG00000053502	cryaa	1: 29096881 ~ 29100923 (+)
ENSDARG00000028213	ttn.2	9: 42894845 ~ 43073960 (-)
ENSDARG00000025943	crygs3	9: 22351443 ~ 22366295 (+)
ENSDARG00000021889	gja3	9: 21407987 ~ 21409466 (+)
ENSDARG00000041171	crygs2	9: 27733334 ~ 27738110 (-)
ENSDARG00000040736	crygm7	9: 21993092 ~ 21994057 (+)
ENSDARG00000040735	crygm6	9: 22000812 ~ 22001778 (+)
ENSDARG00000018797	crygmxl1	9: 22056172 ~ 22057658 (-)
ENSDARG00000115234	crygm2b	9: 22068412 ~ 22069364 (-)
ENSDARG00000053512	crybb2	8: 42629748 ~ 42636278 (+)
ENSDARG00000074170	fbxo4	8: 31646031 ~ 31701157 (-)
ENSDARG00000076312	myot	14: 12222543 ~ 12307522 (-)
ENSDARG00000039486	bag3	13: 25486608 ~ 25498661 (+)
ENSDARG00000013251	hsf4	18: 22739732 ~ 22753637 (-)
ENSDARG00000008818	hsf1	19: 3056450 ~ 3082268 (+)
ENSDARG00000041141	cryba1a	15: 28086193 ~ 28107505 (-)
ENSDARG00000042621	cryaba	15: 18119618 ~ 18124678 (-)
ENSDARG00000111612	mapkapk3	11: 34580085 ~ 34628789 (-)
ENSDARG00000068507	crybb1	10: 44021147 ~ 44027391 (-)
ENSDARG00000024548	cryba4	10: 44042033 ~ 44051808 (+)
ENSDARG00000042992	crygs1	22: 11710467 ~ 11714158 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000042621

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences