Fish Single-cell RNA Database

GENE ID: ENSDARG00000057661

Symbol	Location	Gene type	Genome version	Species
aldoca	15: 16079586 ~ 16098531 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000057661 (aldoca), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000005897	dera	4: 12755136 ~ 12766418 (-)
ENSDARG00000062085	tkfc	7: 19738665 ~ 19760223 (+)
ENSDARG00000021366	fbp1a	5: 44833313 ~ 44843738 (-)
ENSDARG00000012366	fbp2	5: 44814064 ~ 44829719 (-)
ENSDARG00000020364	fbp1b	5: 35458190 ~ 35462126 (+)
ENSDARG00000055855	kcnc3a	3: 31953145 ~ 32053929 (+)
ENSDARG00000016480	slc17a7a	3: 16612574 ~ 16654088 (+)
ENSDARG00000060797	pfkmb	6: 39737408 ~ 39765546 (-)
ENSDARG00000012801	pfkpb	2: 48119494 ~ 48171441 (-)
ENSDARG00000068232	cbln12	2: 38121415 ~ 38125657 (-)
ENSDARG00000039098	ca8	2: 21855036 ~ 21878527 (+)
ENSDARG00000043548	atg4da	1: 51386649 ~ 51406531 (+)
ENSDARG00000060504	pfkla	9: 52628899 ~ 52678995 (-)
ENSDARG00000043457	gapdh	16: 17189839 ~ 17200120 (-)
ENSDARG00000040988	tpi1b	16: 12236339 ~ 12254994 (+)
ENSDARG00000039914	gapdhs	16: 45044642 ~ 45069882 (-)
ENSDARG00000029874	khk	17: 12408188 ~ 12423175 (+)
ENSDARG00000032896	xgb	17: 1664632 ~ 1703259 (-)
ENSDARG00000103369	taldo1	18: 50795174 ~ 50799510 (-)
ENSDARG00000039602	atoh1c	12: 11768114 ~ 11768889 (-)
ENSDARG00000014287	eno2	19: 5072918 ~ 5090732 (+)
ENSDARG00000025012	tpi1a	19: 5094218 ~ 5103313 (-)
ENSDARG00000057661	aldoca	15: 16079586 ~ 16098531 (-)
ENSDARG00000099744	gap43	15: 47161917 ~ 47176151 (+)
ENSDARG00000006019	tktb	23: 20113378 ~ 20126257 (-)
ENSDARG00000014179	pfkma	23: 27553786 ~ 27571667 (-)
ENSDARG00000022456	eno1a	23: 22656477 ~ 22678882 (+)
ENSDARG00000029689	tkta	11: 36989696 ~ 37035835 (+)
ENSDARG00000090106	slc17a7b	24: 38557989 ~ 38579066 (-)
ENSDARG00000028000	pfkpa	24: 3963684 ~ 4004537 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	Purkinje cells (cluster: 19)	marker	DOI:10.1038/nbt.4103
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	Cranial ganglion (cluster: 9)	potential marker	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (24hpf)	head	baseline	24hpf, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000057661

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences