Fish Single-cell RNA Database

GENE ID: ENSDARG00000044797

Symbol	Location	Gene type	Genome version	Species
cd8a	21: 11560153 ~ 11563406 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000044797 (cd8a), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045673	il22	4: 13544595 ~ 13548806 (-)
ENSDARG00000036748	nitr8	7: 17332123 ~ 17337345 (-)
ENSDARG00000098626	nitr12	7: 17253149 ~ 17258812 (-)
ENSDARG00000096387	ighv1-1	3: 34059697 ~ 34060153 (-)
ENSDARG00000096280	ighz	3: 33994684 ~ 33997763 (-)
ENSDARG00000096355	ighv1-4	3: 33963247 ~ 34095221 (-)
ENSDARG00000089622	fgd5b	6: 40482330 ~ 40499799 (+)
ENSDARG00000062864	gk5	2: 16652238 ~ 16694635 (+)
ENSDARG00000078022	fyco1b	2: 50722439 ~ 50765082 (+)
ENSDARG00000036588	mhc1zba	1: 47155424 ~ 47161996 (-)
ENSDARG00000077809	il13	9: 54301736 ~ 54304684 (-)
ENSDARG00000070668	cd4-1	16: 11911897 ~ 11946139 (-)
ENSDARG00000041976	il17a/f3	20: 34792166 ~ 34794465 (+)
ENSDARG00000096787	selp	20: 33962828 ~ 33966148 (-)
ENSDARG00000078279	foxp3b	8: 23436411 ~ 23454577 (+)
ENSDARG00000024522	prf1.6	8: 29670527 ~ 29677302 (-)
ENSDARG00000037598	prf1.5	8: 29701428 ~ 29706882 (-)
ENSDARG00000055750	foxp3a	8: 25716308 ~ 25729543 (-)
ENSDARG00000104635	mhc2b	8: 36268747 ~ 36292840 (+)
ENSDARG00000043934	il17a/f2	17: 12730025 ~ 12733858 (+)
ENSDARG00000004473	tbx21	12: 28749189 ~ 28770817 (+)
ENSDARG00000002956	si:dkey-32n7.4	12: 4114401 ~ 4145033 (+)
ENSDARG00000021444	prf1.2	19: 24161712 ~ 24163845 (-)
ENSDARG00000001572	prf1.3	19: 5259503 ~ 5265155 (-)
ENSDARG00000058682	cd8b	21: 11535304 ~ 11544499 (+)
ENSDARG00000044797	cd8a	21: 11560153 ~ 11563406 (+)
ENSDARG00000076532	si:ch211-222l21.1	11: 40677616 ~ 40696136 (-)
ENSDARG00000071679	mydgf	22: 5135193 ~ 5145469 (+)
ENSDARG00000052122	rag1	25: 9003230 ~ 9009902 (+)
ENSDARG00000099401	ccl33.3	25: 12841940 ~ 12844002 (+)
--	il1rl1	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	Macrophages (cluster: 15)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000044797

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences