Fish Single-cell RNA Database

GENE ID: ENSDARG00000054252

Symbol	Location	Gene type	Genome version	Species
taar18d	10: 40531123 ~ 40532157 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000054252 (taar18d), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000042937	si:dkey-256e7.5	1: 17618015 ~ 17650223 (-)
ENSDARG00000042936	fam228a	20: 25350435 ~ 25355985 (+)
ENSDARG00000092758	caiap	20: 15560141 ~ 15564489 (+)
ENSDARG00000017437	adcy3b	20: 46651916 ~ 46693942 (+)
ENSDARG00000008095	olfcd1	18: 33212589 ~ 33216757 (+)
ENSDARG00000094735	olfcx1	18: 33185819 ~ 33282047 (+)
ENSDARG00000056180	olfck1	18: 33284202 ~ 33294131 (+)
ENSDARG00000040594	olfcq3	18: 33373811 ~ 33378068 (+)
ENSDARG00000061883	olfcq6	18: 33420995 ~ 33424553 (+)
ENSDARG00000055994	olfcq9	18: 33490315 ~ 33493613 (+)
ENSDARG00000056006	olfcq12	18: 33557125 ~ 33561739 (+)
ENSDARG00000068549	olfcq14	18: 33580391 ~ 33586704 (+)
ENSDARG00000056014	olfcq16	18: 33652976 ~ 33656425 (+)
ENSDARG00000035214	olfcq17	18: 33675664 ~ 33679254 (+)
ENSDARG00000055920	olfcq18	18: 33685119 ~ 33689274 (+)
ENSDARG00000105721	or128-6	15: 5210468 ~ 5212930 (-)
ENSDARG00000058762	or128-3	15: 5228580 ~ 5230423 (-)
ENSDARG00000054720	or118-1	15: 31311716 ~ 31313932 (-)
ENSDARG00000092406	or115-8	21: 40254429 ~ 40256146 (+)
ENSDARG00000022319	or115-5	21: 40287100 ~ 40289652 (+)
ENSDARG00000043142	or108-3	10: 36178713 ~ 36180091 (+)
ENSDARG00000068660	or105-1	10: 36345176 ~ 36346363 (+)
ENSDARG00000096168	taar20g	10: 40359577 ~ 40360635 (-)
ENSDARG00000054252	taar18d	10: 40531123 ~ 40532157 (-)
ENSDARG00000054050	vsig8a	10: 19525839 ~ 19551118 (+)
--	v2rh11	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (24hpf)	head	baseline	24hpf, untreatment	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000054252

EXPRESSION

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